Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4269 ATGAAGGCTACGAAAAGCCCGATCCACGCCGTGACCAAATGGCTTCGCCGGCAACCGCCGAAGATGAAGTTGTTTCTGGCGATTCTTTCGGGCATTGCAGCTTTGGTTTTTCTTAGAATGATCGTTCACGACCACGACAATCTCTTCGTAGCTGCTGAGTTTGTGCATGCATTAGGAGTTGCCCTCCTCATTTACAAGCTTGCTCAAGAAAAAACATGTGCCGGACTCTCGCTTAAATCACAGGAACTCACAGCTATATTTCTAGCAGTTAGACTATACTGCAGTTTTGTCATGGAATACGATATACACACCTTACTCGATACTGCAACATTGGGGACGACCCTCTGGGTTATTTATATGATACGCTTCAAACTGAAATCCAGTTATATGGATGCTAAGGACAACCTTGCAATATACTATGTGGTGATACCTTGTGCTGTACTGTCTTTGCTTATTCACCCAACAACCCGGCATCATTATGCTAACAGGATTCTCTGGGCTTTTTGTGTTTATCTTGAAGCTGTGTCGGTTCTACCTCAGTTGCGGGTCATGCAGAACACTAAGATTGTTGAACCATTCACAGCACACTATGTTTTTGCCCTTGGAGTTGCAAGGTTCTTGAGTTGTGCACATTGGGTTCTGCAGGTATTAGATACTCGTGGACGTCTATTAACTGCTTTGGGTTATGGATTGTGGCCTTCTATGGTACTTCTATCAGAAATTGTCCAAACTTCAATCCTGGCAGATTTCTGCTACTACTACATCAAGAGCCTTGTTGGGGGACAACTTGTTCTTAGGCTTCCTTCGGGAGTGGTGTGA 819 0.4444 MKATKSPIHAVTKWLRRQPPKMKLFLAILSGIAALVFLRMIVHDHDNLFVAAEFVHALGVALLIYKLAQEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLGTTLWVIYMIRFKLKSSYMDAKDNLAIYYVVIPCAVLSLLIHPTTRHHYANRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTSILADFCYYYIKSLVGGQLVLRLPSGVV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4269 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr3g4269 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr3g4269 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr3g4269 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr3g4269 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr3g4269 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr3g4269 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr3g4269 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4269 Mtr-Chr3 56544235 56547208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4269 5 272 Miscellaneous Gene Families AT2G21190 79.851 8.05e-167 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4269 - K10949 gmx:100787747 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4269 3 56544235 56547208 Mtr3g4269 3 56544235 56547208 ECH