Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4243 ATGGATAATAATGAAGATATGCTTTCTGGAAATGATGATAAGAGGATTAAACCGGTGGAAATTGGTTTGGATTCTGATAATGAACCTATATTTAAACTAAAGAAGCCGCGTTGTGTTAAGAAGAAGCTTTGCTTGGTGTCAGAGGGGACTGGTGGGAATGCTGCTGACTCTGTTGGGAAATTTGTTGATGTAGTAGTACAAGAGGATTTGGGGGGTATGGATGATACACTAGCTTGTTTTAGGAAGAGATTGAAGGGTCCAAAGAGAGATCGGGGCTCAAGAGGTGATAAAGAGAAAGATTCTAATGTGAATGTTGCGGTGGAATCTTCTGATGGGTCTTTGAATGTTTCTTGCCAATATGAAGGTTTGGATGAAAAATCTTTGTTGAATAAGGACAGTGCTTGTGAAGGGCAAGGTGCTGGAGAAAATGGATCTGATTTGGATATGGATATGAAAACAGCGGGTAGCTGTCAATTGAATGTAGAAGGGCCTAATGTGGATTTGGCACTGAAGGGAATTGAGGATCTTGATGTGTCTGAAGATGGTTTGATCGCAGAGGGATCTAGAAATATTCCAAAAGATGAAAAAGGGGTTGATCCTTTGCTTGATGCTGGTCTGCCACACTCTTCTGATGAAACAATGGGAGATTCTTTGTCAGAAATTTTACAACCAGCACAATCTAGTTTTGTTAGTAAGTCTTGTGCTGCTGTAAGTTCAGAGCAGAAATGTGGGAGCCAGAATGTGAATGACGGGTTGAGCCTTGACTCCAAAAGTGCCAGAAAAACTGCTGAGGGTGTACATGATTCAAACATTCACGATGGACCATTAGCCGATCCCTGTTTTTTAGCCAACGTCTGCCATGGAGATAGCCAGCAATTGTCTTGTGTACAATCTGAAGACACTTGTCCTCCTTCTGACCAAAAGGATGCATTAGAAGAAAGAATTCTCAATGATGGTTTAAAGAAGTGTTCTGCAACATTGCATGATGTTGAAGAAATCACTGACATTGTCTCTCTCCCGAAATTGGGGGAAGGGGTGTCTCCAATTATTGAGGGTGAGCTCAAGAATAACTTGACTGATGACCAAGCAGAACTGTGTAATATTCCTTTAAAATGCAGTGATTTTACTTCCAAGGACAAAGAAAAGCTCCCCCCTTGTGATTCTGGGCCCCTGACTAAATCATCTGAAAATATACGGGATAAAATTAATCACCTGGTTTCTGAAAATGTATTCCAGGGATCCTCAAGAAATGGAGCTATGGCATTCTCTGGATGCAACCCAAAATTAGATGAAGGTGTGCATTCTGAAAGTAAGTTTGTCTCTGGTAGAAATTGCTGCGATCAGAAAATTTTAGATACAAAGGATGAAGCAAGGATTTTTGTTTCTGGTAATTTGCTTGAAAAAAATTATGCAGCTTCCGGCGGTTGTTTATATCCTACAGTGTCCGATGAAACAGTTAAATCTGAATTGGCTGCTCAGCTAAATCACCTAGAGATAGTACCTTTAGAAACACACAATATTCCAAAGGACTCTGTTGACTATATTCCAAAATGCAGTTCAGTATTAGATCCGACTCAACCTTCCAAGAATACATTTGAAAAGGTTTCTCTTGCAAATGGTGATTGTTTCTATGCCAAGAGAGAAACTGAAGATGCCTCTCCTCAGAGTTCAATTCCAGAGAAAACTGAGAATTCTGCAGAATATGCTGCTTCTGTGTCTGAGGTAGCCCACTTTGATGATAAGACATCAGCTGTTATGCGCCGCAAGGGTAAAAAGCGTCGGCAGGGGGACATGGCATATGAAGGGGATGCTGATTGGGAGGTTTTAATAAACGACCAACCTTTTCTTGAAAGCCAAAGTGTTGTTGATGGTGAGCGCATTCTTAAACCAAGAGGGAAGCTTGATTCTTTGAATATTGTTGAAGAGTCTGAAAGTGATGCAGTAGCAGTATCAGCTGGGCTGAAAGCCCATGAAGCTGGTCCAGTTGAAAAAATAAGATTTCAGGAGATCTTAAAGCGGAAAGGGGGTCTCCAGGAGTATTTAGATTGCAGAAACCAGATCCTAGCTCTCTGGGGCTGTGATATCACACGTATTTTGCCTCTTGCTGACTGTGGGGTTCGTGATACTCCTTCTGAGGATGAACCTCCTCGCTCTTCTCTTATTAGGGAGGTCTATACATTTCTTGATCAATGTGGTTATATAAATGTTGGAATTGCCTCTCTAAAAGACAATGTTGAAAATAGTGCAAGGCATAGTTATACACTTATAGGAGAAAAAGGATATGAAGAAAGTTATGCAGCATCTGTTGCTGATTCTGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTAAAAAGTCAGATGCCCCTGTAGAAATTATGAGCAGTCTTATAGTAGGTAATGAAGACCTGACAACTGAAGCTAAAGAAGACAGGATGAGTTTTAATGTGGTGGCAATGGATACGTCAAACATTACACAACATGAAAAAAGAAAGTGTTTTGATTGCGAGGAAAAATCTGGGATTCAGGATGGATTAAGTGGACTTGTACACGGGACTGAGCAAAGCAATGAATCTACCTGTGTTAAATCTGCCTCGGGTGATCAGATAGGTGATGTTCTGAATTTTGATTCAAAGATTGGAAAGAGAGTGATTGTCATTGGAGCTGGTCCTGCTGGTCTAACTGCTGCTCGCCACTTGCAACGTCTGGGATTTACTGTAACTGTACTTGAGGCAAGGAGTAGGATAGGGGGTCGAGTATTTACAGATCGCTCATCTCTTTCTGTCCCTGTGGATCTTGGTGCTAGTATTATCACCGGTGTTGAGGCTGATGTGGCTACTGAACGAAGACCAGATCCTTCCGCGTTGGTTTGTGCTCAGTTGGGTCTTGAGTTGACCGTGCTAAACAGTGACTGTCCTCTATATGACATAGTGACGGGACAAAAAGTTCCTGTAGATATGGATGAAGCACTGGAAGCTGAATACAACAGTCTTCTTGATGACATGGTATTGCTTGTTGCCCAGAAGGGTGACCAGGCTATGCGAATGTCCCTTGAAGATGGTTTAGAATATGCCCTTAAGAGGCGCCGTTTGGAACGCTCTCGAAGAAGTAACGAACAAAGAAGTGGCAAAGAAATGGAAGAGGTCTTGAGTCCTCAAGAAAGAAGGATTATGGATTGGCACTTTGCTAATTTGGAGTATGGGTGTGCTGCTCTGCTTAAGGAGGTTTCTCTTCCCTACTGGAATCAAGATGACGTGTATGGAGGATATGGAGGAGCACATTGTATGATTAAAGGAGGTTACAGCACTGTTGTCGAGTCATTAGGTAAAGGGCTTGTCATCCATTTGAACCATGTTGTAACAAACGTGTCTTATGACAGCAAGGAATCAGGCCTGGGTAATAAAGTCAAAGTTTCTACATCAAATGGCAATGAGTTCTTTGGAGATGCTGTTCTGGTTACTGTTCCATTGGGCTGCTTGAAGGCTGAAACTATAAAATTCTCTCCACCTTTGCCCCCGTGGAAATATTCTTCTATTCAGCGTCTTGGATTTGGAGTTCTCAATAAAGTGGTCTTGGAATTTCCTAGTGTGTTTTGGGATGATGCTGTGGACTACTTCGGAGCAACAGCTGAGGAGACAAGCAGAAGAGGCCACTGCTTTATGTTCTGGAATGTCAAGAAGACAGTGGGGGCTCCGGTCCTCATAGCATTAGTAGTTGGGAAAGCGGCCATTGATGGTCAGAATTTAAGCTCTTCTGGTCACGTCAACCATGCATTAATGGTTCTTCGGAAACTTTTTGGGGAGGCTTCAGTACCTGATCCTGTTGCTTATGTTGTCACTGATTGGGGGGGGGATCCTTTTAGCTATGGTGCTTACTCCTATGTTGCTATTGGAGCATCGGGAGAAGACTATGATATATTAGGGAGGCCAGTTGATAAGTGTTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCTGATACAGTTGGTGGTGCAATGATGAGTGGACTCCGAGAGGCTGTGCGCATAATTGACTTATTGAACACTGGAAATGATTATACGGCAGAGGTGGAGGTAGTGGAGGCTATACAGAAACAGTCAGATACAGAAAGAGATGAAGTTAGGGATATTATAAAGAGACTTGATGCAGCAGAGCTTTCCAACTTATTGTACAAGAAGTCTTTAGATGGTGCTCGAATCTTAAGCCGGGAAGCTTTACTGAGGGACTTGTTCCTTAATGCAAAAACCAATGCTGGGCGCTTGCATGTGGCCAAACAGTTGCTAAGTCTTCCCGTTGCAAACTTGAAATCCTTTGCTGGGAGTAAAAAGGGGCTAAACATTCTCAACTCATGGATACTGGACTCAATGGGGAAGGATGGCACCCAACTCTTGCGACATTGTGTGCGTCTTCTTGTGCTTGTTTCAACTGATTTGCTTGCTGTGCGCTTATCAGGCATTGGGAAAACAGTGAAGGAAAAAGTTTGTGTACACACTAGCCGTGATATTCGTGCTATAGCAAGTCAATTGGTTAGTGTATGGCTTGAAGTCTTTCGCAAGGAAAAGACATCTAATGGAGGACGAAAGCTGTCAAGACATGCAAATGCCGTAGATATATCGAAGAGAAAATGTATTAAAGATCCAGCATCAGGAAAACCACCTCTGAGTTCGTATCATGGTACTTTTGAGAATAAAGGAGGTATCTTAACTCCTGCAATGGATTCAGCTTCCATTGCACAAATGAAAAAATCCCACGGCAAACAAGGAAGTCAGCAAGCGGTAAATGACTTATGGCATGATGTCAGTTCTTCTAGATCCCAAGGTTCAACAGGAAAAACAGACACTGAGATGAAGGATACCCACTGTGCTATGTCTGAGGAAGAAAAGGCTGCTATTGCTGCTGCAGAAGCTGCTCGTGCAAAAGCACTTGTTGCTGCCGAGGCATATACCTCTGCAGAAGTTAGGAACAGTGCGCAACTCCAGCTTCCAAAGATACCCTCATTCCACAAATTTAAGAGGCGGGAACAATATTCACAAAATGATGAGAGTGATAGTAGGAAAAAATGGTCTGGTGGTGTCTTGGGAAGGCAAGATTGTATTTCAGAGATTGATTCTAGAAATTGCAGAGTTAGGGACTGGTCTGCTGATTTCTCTGCTGCTTGTGTTAACCTCGATAATTCCAGAATGTCAGCTGATAATCTCTCACAGCGGAGTCATTCAAATGAGATTGCAACCCATTTGAACTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGTGGAAAGCAGTTTATACACCAAAGCTTGGATTGACTCAGCTGATGGTGAGGGAATAAAAGACTATCACGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCAGGTTCTGATTTTTCCAATCCAGCCATACATTTGAAAGATGAAGAGGGTTCAAATGCCTGTTCAAGGTTACGCCGGAACCATGATGGAGTGGCAAATGACAGCTCTATTTCACAGGTTACTGTGAATAAGGAGAACTCAAAAAATCATTCTCGAGGAGCAGATTGTATCAAAAAGGCTGTAGCAGATTATGTTGCGTCTTTACTTATGCCTCTTTATAAGGCAAGAACACTAGACAGGGATGCATACAAGGCTATAATGAAGAAAAGTACAGCCAAGGTCATGGAGCAATCCACAGATGCAGATAAAGCCTTGACTGTTCACGATTTTCTAGATTTCAAGCGGAAGAATAAGATTCGACCTTTTGTTGACAAATTGATTGAGAAACACATGGAAATGAAACCAGATGTGAAATCTTAG 5793 0.4238 MDNNEDMLSGNDDKRIKPVEIGLDSDNEPIFKLKKPRCVKKKLCLVSEGTGGNAADSVGKFVDVVVQEDLGGMDDTLACFRKRLKGPKRDRGSRGDKEKDSNVNVAVESSDGSLNVSCQYEGLDEKSLLNKDSACEGQGAGENGSDLDMDMKTAGSCQLNVEGPNVDLALKGIEDLDVSEDGLIAEGSRNIPKDEKGVDPLLDAGLPHSSDETMGDSLSEILQPAQSSFVSKSCAAVSSEQKCGSQNVNDGLSLDSKSARKTAEGVHDSNIHDGPLADPCFLANVCHGDSQQLSCVQSEDTCPPSDQKDALEERILNDGLKKCSATLHDVEEITDIVSLPKLGEGVSPIIEGELKNNLTDDQAELCNIPLKCSDFTSKDKEKLPPCDSGPLTKSSENIRDKINHLVSENVFQGSSRNGAMAFSGCNPKLDEGVHSESKFVSGRNCCDQKILDTKDEARIFVSGNLLEKNYAASGGCLYPTVSDETVKSELAAQLNHLEIVPLETHNIPKDSVDYIPKCSSVLDPTQPSKNTFEKVSLANGDCFYAKRETEDASPQSSIPEKTENSAEYAASVSEVAHFDDKTSAVMRRKGKKRRQGDMAYEGDADWEVLINDQPFLESQSVVDGERILKPRGKLDSLNIVEESESDAVAVSAGLKAHEAGPVEKIRFQEILKRKGGLQEYLDCRNQILALWGCDITRILPLADCGVRDTPSEDEPPRSSLIREVYTFLDQCGYINVGIASLKDNVENSARHSYTLIGEKGYEESYAASVADSEDGVSFIVGQTKKSDAPVEIMSSLIVGNEDLTTEAKEDRMSFNVVAMDTSNITQHEKRKCFDCEEKSGIQDGLSGLVHGTEQSNESTCVKSASGDQIGDVLNFDSKIGKRVIVIGAGPAGLTAARHLQRLGFTVTVLEARSRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSALVCAQLGLELTVLNSDCPLYDIVTGQKVPVDMDEALEAEYNSLLDDMVLLVAQKGDQAMRMSLEDGLEYALKRRRLERSRRSNEQRSGKEMEEVLSPQERRIMDWHFANLEYGCAALLKEVSLPYWNQDDVYGGYGGAHCMIKGGYSTVVESLGKGLVIHLNHVVTNVSYDSKESGLGNKVKVSTSNGNEFFGDAVLVTVPLGCLKAETIKFSPPLPPWKYSSIQRLGFGVLNKVVLEFPSVFWDDAVDYFGATAEETSRRGHCFMFWNVKKTVGAPVLIALVVGKAAIDGQNLSSSGHVNHALMVLRKLFGEASVPDPVAYVVTDWGGDPFSYGAYSYVAIGASGEDYDILGRPVDKCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDLLNTGNDYTAEVEVVEAIQKQSDTERDEVRDIIKRLDAAELSNLLYKKSLDGARILSREALLRDLFLNAKTNAGRLHVAKQLLSLPVANLKSFAGSKKGLNILNSWILDSMGKDGTQLLRHCVRLLVLVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRKEKTSNGGRKLSRHANAVDISKRKCIKDPASGKPPLSSYHGTFENKGGILTPAMDSASIAQMKKSHGKQGSQQAVNDLWHDVSSSRSQGSTGKTDTEMKDTHCAMSEEEKAAIAAAEAARAKALVAAEAYTSAEVRNSAQLQLPKIPSFHKFKRREQYSQNDESDSRKKWSGGVLGRQDCISEIDSRNCRVRDWSADFSAACVNLDNSRMSADNLSQRSHSNEIATHLNFREHSGESVAVESSLYTKAWIDSADGEGIKDYHAIERWQSQAAAAGSDFSNPAIHLKDEEGSNACSRLRRNHDGVANDSSISQVTVNKENSKNHSRGADCIKKAVADYVASLLMPLYKARTLDRDAYKAIMKKSTAKVMEQSTDADKALTVHDFLDFKRKNKIRPFVDKLIEKHMEMKPDVKS* 1931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4243 1930 PRINTS Adrenodoxin reductase family signature 882 904 - -
Mtr3g4243 1930 PRINTS Adrenodoxin reductase family signature 905 918 - -
Mtr3g4243 1930 MobiDBLite consensus disorder prediction 1 20 - -
Mtr3g4243 1930 MobiDBLite consensus disorder prediction 86 108 - -
Mtr3g4243 1930 Gene3D - 883 1342 IPR036188 -
Mtr3g4243 1930 MobiDBLite consensus disorder prediction 86 104 - -
Mtr3g4243 1930 SUPERFAMILY Homeodomain-like 647 740 IPR009057 -
Mtr3g4243 1930 Gene3D - 644 749 IPR036388 -
Mtr3g4243 1930 SUPERFAMILY FAD-linked reductases, C-terminal domain 1182 1293 - -
Mtr3g4243 1930 Pfam Flavin containing amine oxidoreductase 891 1344 IPR002937 GO:0016491
Mtr3g4243 1930 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 576 1926 - -
Mtr3g4243 1930 SUPERFAMILY FAD/NAD(P)-binding domain 880 1347 IPR036188 -
Mtr3g4243 1930 Gene3D - 970 1299 - -
Mtr3g4243 1930 MobiDBLite consensus disorder prediction 1597 1618 - -
Mtr3g4243 1930 Pfam SWIRM domain 657 735 IPR007526 GO:0005515
Mtr3g4243 1930 ProSiteProfiles SWIRM domain profile. 645 745 IPR007526 GO:0005515
Mtr3g4243 1930 PANTHER FLAVIN MONOAMINE OXIDASE 576 1926 - -
Mtr3g4243 1930 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1442 1526 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4243 Mtr-Chr3 56294540 56304032 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Mtr3g4243 Amino_oxidase 1.1e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4243 - - mtr:MTR_3g113170 3779.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4243 3 56294540 56304032 Mtr3g4243 3 56294540 56304032 ECH