Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4236 ATGGGAGCTCTTGCTACATTATCTTCTTCTTCTCCTTGGACTTCCGAGGATGATCTTTTGCTCAAAACCAACGTTGAGGTTGAGAATGGAGCTTCCTTGGAAGCAATTGCAAAAGGCGCAGTGCAGTTTTCTCGAAAGTATAGTTTTGAGGAAATACAAGAAAGATGGCACAAGATACTCTATGACCCTATCGTATCTAAGGATGCCTCTTCCTCTATAAGAGATTTCGAGCATTCTGTTTCGCCTCTCCCATCAAAGTTCTTCAAGATTGAACATTTGAAAGATGAGCAGAAAGATGTTTCTGTTAAGAGAAAAGTTCACACTGTTCGAAATTCTTATTATGCCATGCGTAAAAGAATCCGCAGAGATATGCAAACTTCCATGGACTACAATTTTCTAGTTGATTCAGAAAATGACAATTATGCGGTAAATGGAAATGAGCCTTTGCCTGAAAACTGTGTACTTGAGGGTTCAACTTCGAATGACTTTTCAAATCATGATCCGTCGCACTACGGTCTTCCAGAAAATTTTATGGATGTTGATATTGGAGTTGCTGCTCAAGCGTTTTACACTGGAGTTGATGATACACTTGAAGAGAATTTTCCCATGGACCAAAACAATATATCTGAGGAGGAACCTCAAATTCATGAAGATAATGTGCTTCTGAATGGAACTGCCGAGGAATTTGGCGATTCAATAGAACTAGATATAGAAAAATTTATTGGAGATGATGAACTAGATGATATGTCTTTTTCCGCATTTCACCAAATCAACAATGACCCTGCAAATTTGTGCTCCGAGTTTGATGAAGATTATATGTTTGATTCACCTGAGTTAGAGTGTGGGAATTCATTTGACGATTTAGAGTTATCACTTCCTGACATTCAGGACATGCCGGTTTGGAGAACAGAAGAACAGGATAATATTCCATGTGATGGTTCAAAAGATTCCATTGCTTGCGAGGATGGTTATCTGGAAGAACTGTCCAATTCACTCTTAAACTTCACTGGTGAGGAAGAGCTATTTCTGATGGATTCTGTTGGAAAAGATGGGATTGGTAAATCTTATTATGACGGTCTGAGTTCGCTTTTACTAAACTCTCCAATTGATGGTTGTTCAAATCAGATACCTGAAACGGCTGAAGTAGAGTTATTATTGACCCCACACGAAGATGTTAAAAATCCGTCTGTTTCATGTCGCACAGAAGTAGACGACAATGCAGGAAAGGCCGAAACAGAGCTGTTAGCGGCCTTTGATGCACATGTTAAAGGTATGTCAGTTTCATGTCGTGCAGAAGTAGATGACAACACAATGTCACAATCTAATGGCATGGAAGTAGTTCAAAAACCAGAGTTCCAAATGGCAGCTTCCGCTTCAGCTAAAGACCCTCAATTTCCTGAACTAATTAATGGAGTTGTTCCCTGTATAATAAATACTGAGGACCCAGAAGTTCCATCCAATGATGATGTTTTCCTACCCTTTAATGAGCCTCCCCCAACAATTTCCTGTTCATCCGAATCAGCTAGCAGGAGAGGTAAAGTTTTGATGCAGGTTGAACAAAAAAGCTCCGTAGGAGCTCAGGTTTCTTCTCAGACAACAGGAGCCCATTGCCTTCCAGGACCTGTTTCTGGTTCTAAGATAAAATATGAGTTGTCTAATAATCATGCATCACACAGACTGTCTAGAAATGCAATTATTGCTTCCAGTGACCTAGGTGGAAACAATGATGCAACAAACAAAACTCATGCTGCTCTACATGCAAGTCCTAAGGAAAAACCCGTCGATGTTAGCTTCGTAAAGCATCAAAGCAATAATGTGACAAATTTGTCACATAAGAAACCAGCCCTCGGAAATGGCCTCAGAAATCATGGCCAACCTAATGGTTCTAGCTTGAAACAGGAACGGGATGTAGCATTGCCAGTTGAAAATAATCAGTTGCAACATGCTGAAGTGGGGTCCGCAGATGTTCTGGGGCCTGAGATGGTGGTTTACAGTGAAAGGTTAGACGAGGAAGAGCAATATATCGAAAGTGATGACGAAGTTCCTTATTATTCTGATGTAGAGGCCATGGTACTTGATATGGACTTGGAACCTGATGATCATGATTTATATGATAATGAAGAAGTATCAAGATATCAACACGAAGAAACTAAGCGGGCTATCATAAGGCTGGAGCAGGGCGCTCATTCTTATATGCAGAGAGCCATGGCTTCACATGGAGCATTGGCCCTTTTATATGGTCGCCACTCAAAGTACTATATCAAGAAAACTGAGGTTTTAGTTGGACGATCAACAGAAGGTTTTCATGTAGATATTGACTTAGGCAAAGGAGGTTGTGCCAATCTAATATCTAGACGTCAGGCAATCATAAAAATGGATAAAGATGGATCATTCTTCATTAAAAACATTGGCAGGAGTTCAATGCTGATAAATAGCACAGAATTGCACACTGGTCAATCTCAAAGACTGCTTTCCAATTATCTGATTGAGTTGAAGGGCACACAATTCATATTCGAGATAAATCAAAGTGGTATGAAGCGGTAG 2544 0.4017 MGALATLSSSSPWTSEDDLLLKTNVEVENGASLEAIAKGAVQFSRKYSFEEIQERWHKILYDPIVSKDASSSIRDFEHSVSPLPSKFFKIEHLKDEQKDVSVKRKVHTVRNSYYAMRKRIRRDMQTSMDYNFLVDSENDNYAVNGNEPLPENCVLEGSTSNDFSNHDPSHYGLPENFMDVDIGVAAQAFYTGVDDTLEENFPMDQNNISEEEPQIHEDNVLLNGTAEEFGDSIELDIEKFIGDDELDDMSFSAFHQINNDPANLCSEFDEDYMFDSPELECGNSFDDLELSLPDIQDMPVWRTEEQDNIPCDGSKDSIACEDGYLEELSNSLLNFTGEEELFLMDSVGKDGIGKSYYDGLSSLLLNSPIDGCSNQIPETAEVELLLTPHEDVKNPSVSCRTEVDDNAGKAETELLAAFDAHVKGMSVSCRAEVDDNTMSQSNGMEVVQKPEFQMAASASAKDPQFPELINGVVPCIINTEDPEVPSNDDVFLPFNEPPPTISCSSESASRRGKVLMQVEQKSSVGAQVSSQTTGAHCLPGPVSGSKIKYELSNNHASHRLSRNAIIASSDLGGNNDATNKTHAALHASPKEKPVDVSFVKHQSNNVTNLSHKKPALGNGLRNHGQPNGSSLKQERDVALPVENNQLQHAEVGSADVLGPEMVVYSERLDEEEQYIESDDEVPYYSDVEAMVLDMDLEPDDHDLYDNEEVSRYQHEETKRAIIRLEQGAHSYMQRAMASHGALALLYGRHSKYYIKKTEVLVGRSTEGFHVDIDLGKGGCANLISRRQAIIKMDKDGSFFIKNIGRSSMLINSTELHTGQSQRLLSNYLIELKGTQFIFEINQSGMKR* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4236 847 Pfam N-terminal region of micro-spherule protein 13 78 IPR025999 -
Mtr3g4236 847 PANTHER MICROSPHERULE PROTEIN 1 2 846 IPR037912 GO:0002151|GO:0031011|GO:0071339
Mtr3g4236 847 SUPERFAMILY SMAD/FHA domain 739 840 IPR008984 GO:0005515
Mtr3g4236 847 CDD FHA 751 841 IPR000253 GO:0005515
Mtr3g4236 847 Pfam FHA domain 760 831 IPR000253 GO:0005515
Mtr3g4236 847 ProSiteProfiles Forkhead-associated (FHA) domain profile. 759 815 IPR000253 GO:0005515
Mtr3g4236 847 PANTHER FHA DOMAIN PROTEIN 2 846 - -
Mtr3g4236 847 Gene3D - 705 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4236 Mtr-Chr3 56233762 56239145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4236 - - cam:101513703 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4236 3 56233762 56239145 Mtr3g4236 3 56233762 56239145 ECH