Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4228 ATGTTTCAGGAGGAAATGGAATCGAGTAGCTTGGTAAGCAATGGCCGCGTGGATCGGCATGGTAGGATTGCTGATAAAAGAACAACTGGAGGATGGAAGGCAGCTCCCTTCATCATAATGAACGAGGTGATAGAGAGGTTGGCGTTAAATGCGATTGCAGTGAATATGACGGCTTACTTGGTATTTCAAATGCATCAATCACTTCCGGATGCTGCTACTCATGTCACAGACTGGGCTGGAGCTGCCTATGTACTCACCCTCTTTGGAGCATTTCTAGCAGATGCTTATTTGGGTCGCTTCAAAACTATTATTGTTTTCTCAGCAATCTATGCCGTGGGGATGGTTTTGCTGACAATGTCGGCCTCTTTCGACACACTGCGCCCGCAGAAATGTCTGGCGAAACCATGCAAGGAGGCAAGTCAAGGCCAAATCTCCTTCTTGTACGGTGCACTTGGCCTTATTGCTTTGGGTACAGGAGGAATCAAGCCTTGTGTATCATCCTTTGGAGCAGACCAATTTGACGAGGGAGATGAAAAAGAAGTCCAACAGAAATACGCTTTCTTTAATTGGTTTTTCTTTGCTATCAACATGGGTTCTCTTCTTGGAATCACGATATTGGTTTATGCACAAGATAAACTAGGGTGGGGTTGGGGTTTTGGAATACCCACAATAACTATGGTTTTATCTATCGTTCTTCTAGCTGCTGGTGTTCGGTATTACCGTTTTCAAAAGCCAATGGGAAGCCCTTTTACTAGGTTTCTTCAGGTTATTGTAGCCTCCGTCAAGAAACATCGAAAAGGAGTTTCCGTAGAAAATGAACCTACTCTCTATGAGGTTGAGACCACACACTCTGATATTATTGGCGCTCGCAAGCTTCCTCACACACGACAATACAGGTTTTTTGACAAAGCAGCAGTTATAACAGAAAAAGACACAGTTAGCAACAGATGGAGTGTATGCACAGTGACACAAGTCGAAGAATTCAAATCATTCGTTAAAATCCTTCCAGTATCGGCCTCTACCATTGCTCTTGCTATTTCTTTCGCTCAAGTGTCAACCTTCTTTCTTAGTCAAGCCAGCATCATGAATAGAAAACTAGGAAACAAGTTCGAAATCCCAACAGGTTCTGTCCCTGTCTTTGCTGCCATCAACGGCCTCATACTTGTACCTCTCTACGAGAGATTAATAATCCCATTTCTCCGCAAATTTACAGGCCATCACCGTGGCATCACATCGTTACAACGAATGGGTGTTGGGCTTTTTATCTCAATCATCGCTATGGCTTCAGCTGCATTAGTTGAAAAAAGGAGACGCGATCACTACCCGCAACCAAATAGCATGAGTGTGTTTTGGTTGTTACCTCAATTCTTTCTAATTGGTACTGCTGAAGTTTTTACCTATGTGGGACAGTTAGAATTTTTTTACGATGAGGCAACAGATGGGACAAAAAGTATTAGTAGTGCAATGTTTTTGTCTCTGATTGGAATTGGAAGTTGGTTAAGTACTGCTTTGGTGGTGATTATTGTAGTTGCAACTGGAGGACAGGGGAAAGGGTGGCTAAGGAATAATCTTAATGAAAGCAAGTTGGATTGGTTCTTCTGGATATTGACGATTCTCAATGCTGTCAATTTCTTAGTTTATTTGATGGTGGCTATTTATCACAATGGGAAAGAATCATCTGTGAGAGATGAGAACATGGTTGAATTAAGTAACGTCCATCACACGTAA 1728 0.4248 MFQEEMESSSLVSNGRVDRHGRIADKRTTGGWKAAPFIIMNEVIERLALNAIAVNMTAYLVFQMHQSLPDAATHVTDWAGAAYVLTLFGAFLADAYLGRFKTIIVFSAIYAVGMVLLTMSASFDTLRPQKCLAKPCKEASQGQISFLYGALGLIALGTGGIKPCVSSFGADQFDEGDEKEVQQKYAFFNWFFFAINMGSLLGITILVYAQDKLGWGWGFGIPTITMVLSIVLLAAGVRYYRFQKPMGSPFTRFLQVIVASVKKHRKGVSVENEPTLYEVETTHSDIIGARKLPHTRQYRFFDKAAVITEKDTVSNRWSVCTVTQVEEFKSFVKILPVSASTIALAISFAQVSTFFLSQASIMNRKLGNKFEIPTGSVPVFAAINGLILVPLYERLIIPFLRKFTGHHRGITSLQRMGVGLFISIIAMASAALVEKRRRDHYPQPNSMSVFWLLPQFFLIGTAEVFTYVGQLEFFYDEATDGTKSISSAMFLSLIGIGSWLSTALVVIIVVATGGQGKGWLRNNLNESKLDWFFWILTILNAVNFLVYLMVAIYHNGKESSVRDENMVELSNVHHT* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4228 575 Pfam POT family 100 517 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr3g4228 575 PANTHER PEPTIDE TRANSPORTER 11 564 - -
Mtr3g4228 575 CDD MFS_NPF 35 551 - -
Mtr3g4228 575 Gene3D MFS general substrate transporter like domains 4 564 IPR036259 -
Mtr3g4228 575 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 2. 188 200 IPR018456 GO:0006857|GO:0016020|GO:0022857
Mtr3g4228 575 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 89 113 IPR018456 GO:0006857|GO:0016020|GO:0022857
Mtr3g4228 575 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 564 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr3g4228 575 SUPERFAMILY MFS general substrate transporter 26 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4228 Mtr-Chr3 56140170 56144867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4228 7 562 Organic Solute Cotransporters AT3G54140 47.007 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4228 K14638 - tcc:18591470 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4228 3 56140170 56144867 Mtr3g4228 3 56140170 56144867 ECH