Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4217 ATGCTGCTTCGGCGATTACCCTGGATGGCGTTTTCCACCGCCGCACCACTTCCATTGTATTCTTTTTCTTCTTCCATTCCAAAGCAACTTACCTTTTCCCCTTTATCCTTCTGCTCCACCTCCGAACTCCATCTCACTCAACATCCAGATAATAATAAACCTGAACACGAAACTGATAATCGTCGCTCGCAGCTTCTCAAACCCGGTCTTTATCTCGTTGGAACACCCATTGGAAATCTTGAAGACATCACCTTCAGGGCTCTCCGGGTGTTGAACTCCGCTCATGTGATACTATCGGAAGACACGAGGCACTCTGGGAAATTGCTTCATCACTACAATATCAAAACACCCCTTATGAGTTATCACAAATTCAATGAATCACAAAGGGAACAACTTGTGCTTAGGAGGTTGAAACAAGGTGAGATTGTGGCACTTATAAGTGACGCTGGAACGCCTGGTATAAGTGATCCTGGTATGGAGTTGGCCAAATTATGTGTTAGTGAAAATGTTCCTGTTGTTCCAATCCCAGGTCCATGTGCTTTGATATCGGCTCTTTCTGCCTCGGGTTTATCCACTGATGAATTTACATTTGTTGGTTTTCTTCCAAAACATTCTGGATCAAGAAGAAAAAGGCTCATGGCTTCGGCGGAGCAAACGGCAACACAAATATTTTACGTTCCTCCTCACAAGCTTTCTCAGTTTCTTGAAGAGGGTTCGTCAATTTTCGGAGATACAAGGAGATGTGTTATTGCTCGAGAAATGACAAAGTTTCATGAAGAGTTTTGGCGCGGTACTTTTGGCGAAGCCAGCAAAGAATTTTCTATTCGTCAGCCAAAGGGAGAACTTACCATATTGATTGAAGGGCATGTGAATTCTAAAGTTGAACCTCCATCAGACATTGAGCTTGAGAATGAATTAAGAGAATTAATTGAAAACGGCGAGAGTCTTTCCACGGCTGTTAAATTGGTAGCTGAAAGAACATCGGTGAGTAGAAAAACTATATATTCACTTGCGTTGCGGAAATTTGGGAAGCAGCTTGAAGTGGAGGATGATTCAAGTTAG 1062 0.4284 MLLRRLPWMAFSTAAPLPLYSFSSSIPKQLTFSPLSFCSTSELHLTQHPDNNKPEHETDNRRSQLLKPGLYLVGTPIGNLEDITFRALRVLNSAHVILSEDTRHSGKLLHHYNIKTPLMSYHKFNESQREQLVLRRLKQGEIVALISDAGTPGISDPGMELAKLCVSENVPVVPIPGPCALISALSASGLSTDEFTFVGFLPKHSGSRRKRLMASAEQTATQIFYVPPHKLSQFLEEGSSIFGDTRRCVIAREMTKFHEEFWRGTFGEASKEFSIRQPKGELTILIEGHVNSKVEPPSDIELENELRELIENGESLSTAVKLVAERTSVSRKTIYSLALRKFGKQLEVEDDSS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4217 353 Gene3D - 54 176 IPR014777 GO:0008168
Mtr3g4217 353 ProSitePatterns RsmI AdoMet-dependent methyltransferase protein family signature. 147 158 IPR018063 GO:0008168
Mtr3g4217 353 Hamap Ribosomal RNA small subunit methyltransferase I [rsmI]. 69 288 IPR008189 GO:0008168
Mtr3g4217 353 Gene3D - 177 294 IPR014776 GO:0008168
Mtr3g4217 353 TIGRFAM TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 70 339 IPR008189 GO:0008168
Mtr3g4217 353 SUPERFAMILY Tetrapyrrole methylase 68 286 IPR035996 GO:0008168
Mtr3g4217 353 CDD RsmI 71 287 IPR008189 GO:0008168
Mtr3g4217 353 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I 52 350 IPR008189 GO:0008168
Mtr3g4217 353 Pfam Tetrapyrrole (Corrin/Porphyrin) Methylases 70 269 IPR000878 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4217 K07056 - gmx:100819709 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4217 3 56017347 56021965 Mtr3g4217 3 56017347 56021965 ECH