Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4211 ATGGGTTCAGTTTGTTGTGTTGCTGCAAAGGATCAAACTCTTCCCAATAGAACTGGAAGTGAAAGTTTTCACAGAAATCCTGTGTGTTCACCTTCATTGAGTTTTCAATGGGATAGATGGGGCCGTGTTGCTAGTGAAATTGATGATCTTTCGTTTCGCGCGTCTCGCAGAGTCAGCAGAAGTGTCAGCATGGAGTTTAAGGGGTCTTTAAGTTCTGATAGAGGAAATTTATCTGATGTGGGGAGCACCCTGGAGAACTCTGTAACACCCATGTCTCAGAAGTCGCCTATTCATGAGCAATTAGGTGCAAATCGGATGACTCTATCTTCAGATCTATCCATGTCAAGTAATTGTTCTACAGTGGCCAAAAATCTGACAGAATCACCAGAGATCGCAGAATCTTCAATACCAAATATTTCTTTATCAATGCCCTCTTCTTTCTCAACACCTACAACCCGCAATCTTAATCGTCACAATCTTCCTAGCCCAACACCATCTAGATGGGCTCATCGATCTCCAGGACACCCACTATTGAGACAAATTTCTGATAGTCGAATCCTGGGTCTGAAATCGCCAGACAACTCTATTTCTGAAGGAAGACCGTCATTTGTGCTGTCCACTTGCAGCAATGACATGATAGCTGGATCCCAATGTGGGTCATCTGATGGCTGGTCTATGCGCACCTTTTCTGAACTGGTGGCATCATCTCAAAAGGAAAGGTGGTCATTTGACAGTGAGCATTTTGGTTCAGGTCGCCACAAGCTAAGTGCAACTAGTAGTAGGTTCTCGTATTCTCCCACCATGGATTTACAATCTTGCGGGGCCTGCTCCAAGCTCTTGACTGAGAGAACTGCATGGAGCAGCCAGAAATTCATTTCCAACAACGACCTCTCAGTTGTTGCTGTGCTGGTCTGTGGTCATGCATATCATGCAGAATGTTTGGAAACCATGACATCAGAAGCAGATAGTTATGATCCAGCTTGTCCAATTTGCATGGTTGGAGAGAAGCACTTGTCAATGTTATCCAGAAAAAGTCTTAGGGCCGAATCTGAAATGAAGGCCAAGAACTACAAGATATCCCGAAACCGTGTAGTTGATAGCTACTTTGATGGCGGATTAGATGGTTATGATCGCCAAAAAAGTGCAGCTTCAAAATTGGAGGCTAGCTCCAGTTCAAGGAGTTCATTAAGAAAACCCTTCTTGAAGCGGCATTTTTCATTGGGATCCAAGTGGAATCGATCCCTGTCTGATAATGATTCTGCCAGGAAGAAGGGGTTTTGGGCAAGATATCGTAAAGATTGA 1302 0.4409 MGSVCCVAAKDQTLPNRTGSESFHRNPVCSPSLSFQWDRWGRVASEIDDLSFRASRRVSRSVSMEFKGSLSSDRGNLSDVGSTLENSVTPMSQKSPIHEQLGANRMTLSSDLSMSSNCSTVAKNLTESPEIAESSIPNISLSMPSSFSTPTTRNLNRHNLPSPTPSRWAHRSPGHPLLRQISDSRILGLKSPDNSISEGRPSFVLSTCSNDMIAGSQCGSSDGWSMRTFSELVASSQKERWSFDSEHFGSGRHKLSATSSRFSYSPTMDLQSCGACSKLLTERTAWSSQKFISNNDLSVVAVLVCGHAYHAECLETMTSEADSYDPACPICMVGEKHLSMLSRKSLRAESEMKAKNYKISRNRVVDSYFDGGLDGYDRQKSAASKLEASSSSRSSLRKPFLKRHFSLGSKWNRSLSDNDSARKKGFWARYRKD* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4211 433 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 427 - -
Mtr3g4211 433 MobiDBLite consensus disorder prediction 67 92 - -
Mtr3g4211 433 SMART ring_2 273 331 IPR001841 -
Mtr3g4211 433 MobiDBLite consensus disorder prediction 142 173 - -
Mtr3g4211 433 SUPERFAMILY RING/U-box 267 332 - -
Mtr3g4211 433 ProSiteProfiles Zinc finger RING-type profile. 273 331 IPR001841 -
Mtr3g4211 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 333 IPR013083 -
Mtr3g4211 433 MobiDBLite consensus disorder prediction 142 166 - -
Mtr3g4211 433 PANTHER EXPRESSED PROTEIN 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4211 Mtr-Chr3 55976275 55980275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4211 - - gmx:100793040 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4211 3 55976275 55980275 Mtr3g4211 3 55976275 55980275 ECH