Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4199 ATGGGTGTGATGAGTGGCCACTGCTGCGCCGTTGTATCACACAAACCCTACCTCTCTCTTTCTCCTCCCAATCTCCGCCATTCACCTCCCATTTCCTCCGTTTCTTCTTCGCCATTTCCACTCACTACTATATCATGCCATGCCACTTCTGCTCTCTCCGCCGAATCTCCTCTCACCGAAAAAGTTGGAAATGGGTTGAAAGATTTTCTTCACATAGATGATTTTGATAAGGACACTATTTTTAAGATATTAGATCGTGCTATTGAGGTCAAGACATTGCTGAAATCAGGGGACAGGACATTTCGACCTTTTGAAGGGAAGACAATGTCAATGATATTTGCTAAACCGTCCATGAGAACAAGGGTTTCATTTGAGACTGGCTTTTCATTGTTGGGTGGCCATGCTATTTACTTAGGACCTGATGACATTCAAATGGGTAAGCGAGAGGAGACTCGTGATGTTGCTCGAGTTTTGTCTCGTTATAACGACATTATCATGGCTCGGGTTTTTTCTCATCAGGACATACTTGATCTTGCAAAGTATGCAACTGTCCCAGTCATCAATGGTTTGACAGATTACAACCATCCCTGCCAGATCATGGCTGATGCCCTTACTATGATTGAGCATGTTGGTCGATTTGAAGGAACAAAGGTTGTTTACGTTGGAGATGGAAATAATATTGTCCACTCATGGTTGTTGATGGCAGCTGTAATCCCTTTTCACTTTGTTTGTGCTTGTCCAAAAGGTTTTGAACCTGATGCAAAAACAGTTGAGAAGGCAAGGAAGGCTGGAATCAGCAAGATTGAGATAACTAATGATCCAAAAGAAGCTGTTAAAGGAGCTGATGTTGTGTATTCAGATGTATGGGCCAGCATGGGGCAAAAGGAAGAAGCTGCATACCGTCGCCAAGTGTTCAAAGAATTTCAGGTGGATCAAAGTCTTATGGATGCGGCTGGTTCAAAGGCATTTTTCATGCACTGCTTACCAGCTGAGCGAGGGGTGGAAGTGACTGAGCAAGTTGTTGAAGCTCCATATTCAATAGTATTCCCTCAAGCTGAGAACCGAATGCATGCACAAAATGCTATAATGCTCCATGTACTCGGCAAGTAG 1110 0.436 MGVMSGHCCAVVSHKPYLSLSPPNLRHSPPISSVSSSPFPLTTISCHATSALSAESPLTEKVGNGLKDFLHIDDFDKDTIFKILDRAIEVKTLLKSGDRTFRPFEGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDVARVLSRYNDIIMARVFSHQDILDLAKYATVPVINGLTDYNHPCQIMADALTMIEHVGRFEGTKVVYVGDGNNIVHSWLLMAAVIPFHFVCACPKGFEPDAKTVEKARKAGISKIEITNDPKEAVKGADVVYSDVWASMGQKEEAAYRRQVFKEFQVDQSLMDAAGSKAFFMHCLPAERGVEVTEQVVEAPYSIVFPQAENRMHAQNAIMLHVLGK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4199 369 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 67 208 IPR006132 GO:0006520|GO:0016743
Mtr3g4199 369 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 66 368 IPR024904 GO:0004585|GO:0006591
Mtr3g4199 369 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 113 132 IPR006130 GO:0006520|GO:0016597|GO:0016743
Mtr3g4199 369 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 195 206 IPR006130 GO:0006520|GO:0016597|GO:0016743
Mtr3g4199 369 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 320 329 IPR006130 GO:0006520|GO:0016597|GO:0016743
Mtr3g4199 369 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 332 355 IPR006130 GO:0006520|GO:0016597|GO:0016743
Mtr3g4199 369 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 41 368 - -
Mtr3g4199 369 Gene3D Aspartate/ornithine carbamoyltransferase 67 197 IPR036901 GO:0006520|GO:0016597|GO:0016743
Mtr3g4199 369 PRINTS Ornithine carbamoyltransferase signature 111 125 IPR002292 GO:0016743
Mtr3g4199 369 PRINTS Ornithine carbamoyltransferase signature 144 157 IPR002292 GO:0016743
Mtr3g4199 369 PRINTS Ornithine carbamoyltransferase signature 184 198 IPR002292 GO:0016743
Mtr3g4199 369 PRINTS Ornithine carbamoyltransferase signature 284 294 IPR002292 GO:0016743
Mtr3g4199 369 PRINTS Ornithine carbamoyltransferase signature 346 357 IPR002292 GO:0016743
Mtr3g4199 369 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 214 365 IPR006131 GO:0006520|GO:0016597|GO:0016743
Mtr3g4199 369 Gene3D Aspartate/ornithine carbamoyltransferase 198 363 IPR036901 GO:0006520|GO:0016597|GO:0016743
Mtr3g4199 369 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, CHLOROPLASTIC-LIKE 41 368 - -
Mtr3g4199 369 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 66 368 IPR036901 GO:0006520|GO:0016597|GO:0016743
Mtr3g4199 369 TIGRFAM orni_carb_tr: ornithine carbamoyltransferase 67 367 IPR002292 GO:0016743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4199 Mtr-Chr3 55841245 55844691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4199 K00611 - gmx:100796780 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4199 3 55841245 55844691 Mtr3g4199 3 55841245 55844691 ECH