Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4197 ATGGGAACCCTCGGAAGAGCGATATACAGCGTTGGACAGTTGATTCGAAAAACTGGACAAGCCGTTGATCGCCTCGGTTCTCATCTCCAAGGTGGCTACATCGAAGAACAGCTGTCTAGGCATCGAACCGTGTTGAACATATTTGACAAGGCTCCTGTTATTGATAAGGATGTTTTTGTTGCACCAAGTGCCGCTGTCATTGGAGATGTCCAGATTGGAAAAGGGTCATCAATTTGGTATGGATCTGTATTGAGAGGTGATGTTAACATCATTAGAATTGGAAGTGGAACTAACCTACAGGATAACTCCCTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACTATTATCGGGGATAATGTTACTGTAGGTCATAGTGCTGTTTTACATGGTTGCACTGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAATTCTACTTGATGGCGTCGTCGTTGAGAAAAATGCCATGGTTGCTGCTGGAGCCCTTGTGAGGCAGAATACAAAGATTCCATCTGGCGAGGTTTGGGCTGGCAATCCAGCGAAGTTTCTAAGAAAGCTCACCGATGAAGAGATAGCTTTTATCTCCCAGTCAGCCACCAATTATACTAACCTTGCACAGGTCCATGCAGCTGAAAATTCAAAGTCCTATGAAGAAATTGAGTTTGAGAAGGTGCTGCGTAAGAAGTATGCAACTAAAGATGAGGAGTATGACTCTATGTTGGGTGTTGTTCGTGAGATTCCACCAGAGCTTATTCTTCCTGATAATGTCTTACCTGATAAAGCAAAAAAAGCTCTTAAAATATGA 819 0.4335 MGTLGRAIYSVGQLIRKTGQAVDRLGSHLQGGYIEEQLSRHRTVLNIFDKAPVIDKDVFVAPSAAVIGDVQIGKGSSIWYGSVLRGDVNIIRIGSGTNLQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGAILLDGVVVEKNAMVAAGALVRQNTKIPSGEVWAGNPAKFLRKLTDEEIAFISQSATNYTNLAQVHAAENSKSYEEIEFEKVLRKKYATKDEEYDSMLGVVREIPPELILPDNVLPDKAKKALKI* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4197 272 Gene3D Hexapeptide repeat proteins 43 222 - -
Mtr3g4197 272 SUPERFAMILY Trimeric LpxA-like enzymes 46 212 IPR011004 -
Mtr3g4197 272 PANTHER EXPRESSED PROTEIN 1 269 - -
Mtr3g4197 272 CDD LbH_gamma_CA_like 53 211 - -
Mtr3g4197 272 Pfam Hexapeptide repeat of succinyl-transferase 118 150 IPR001451 -
Mtr3g4197 272 PANTHER DYNACTIN SUBUNIT P25 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4197 Mtr-Chr3 55826023 55831160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4197 92 195 Miscellaneous Gene Families AT2G17640 30.088 8.34e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4197 K01726 - gmx:100777972 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4197 3 55826023 55831160 Mtr3g4197 3 55826023 55831160 ECH