Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4185 ATGCGAATTCCTAAGAGGCTATTCTCATTTTCTCTCTCTAACTTCTCTCCTCAACTCATATCACCTCTTTTATCTTCTCGGATTTCCTTTGCATTTGGAATTTCCGCTAAACCTTCTCGTCTCTTCCCCAACATCGCATCACCAGGAGCTAGCCAATTGCATTCTCAATCTTCAATGGACGAGAATCATGATGTTGGTATACATGACTCAAGATCAGTGGACTTGCCCGACAGTGATAGTGGAAAACAGCCACGTGTATGGTCATCTTCTCCTGAACATGGATCTAAAACTGATAGAGGCAAACAGATATTTTGTAACCGGTCACTGAATATGAAGAACATTGTTGCTGTGGGATTTGACATGGACTATACTCTGGCACAATACAAGCCCGAAACTTTTGAATCCCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTTACGATTTAGGATATCCTAGTGAGTTACTAAATTGGTCTTTTAACTGGAAGTACATGGTCAGGGGCTTGGTTCTTGACAAAAAACGAGGAAATATCTTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCATGGATTTAGAGAGTTATCAAAAGAAGATAAAGTTGGGACCTACGGAAATACTTTAGTACGCGATTCATTTGACGAGCCAGACTATGCTCTAATTGATACACTTTTTTCTCTTGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGATAGTAATCCTGAAAAGATTCGAGAAGGCGTTGATTATGCTCGCATGTATAAAGATGTTCGAGCTGCTGTTGATTTGTGCCACCGTGATGGGACGTTGAAGCAAATGGTTGCTAAAGATCCAGGAAGGTATATCAATGAAGACAACCTGATAGTGCCCATGCTTGAAATGCTCAGAGAATCTGGACGTGCAACATTTTTAGTGACAAATAGTTTATGGGACTATACAAATACTGTCATGAATTTCCTCTGTGGATCCACAATGGTAGGTGGCAGTAACAATTTTGAATGGCTTCAATACTTTGATGTGGTTATCACTGGCAGTGCGAAGCCAGGATTTTTTCATGAGGAAAATCGTGCCAACCTATTTGAGGTTGTGCCTGAGACTGGAATGCTACTCAATACAGATAATGGCTCTCCTATGCCTCAGGTGGGGAACATCTCAGCAAGGATATTCACAGAAGCAACGAATCACGCTTGCCAAGTTTTCCAGGGAGGCAATGTAGCTCATCTGCATAAACTGCTTTCCATTGAATCAAGTTCACAGGTTCTGTATGTTGGGGATCACATTTATGGAGACATATTACGTAGCAAAAAGGTTCTTGGATGGAGGACAATGCTTGTAATCCCAGAGCTGGAGAAGGAGGTTAAACTCCTCTGGGAATCAAGGGACACCCGGAAGGAAGATTTTTACTTGAATATTCTCATGCAGGAGCTTCAATTCTTGAGGAGTGAGCGTGATCGCATTGAAGATGAAGTACATCATCTGAAGTGGTCTCTTAAATTCAAGAACCCAGATGCTAAGGCCAAACAGAAGCTATCTTCAGCACTTGATAAATTGGAGCTTGAAAGAGAGAAAATGCGATTAATCCATCAAGAAGCTCAAAGAAAATTACATCAAAGGTTTCACGAACCATGGGGACAGCTTATGAAAACCGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGGTTTGCCTGCCTTTATACCAGCCAAGTATCTAACCTGGCCTTGCACTCTCCAGACAAGTATTACAGACCCAGTGAAGATTTTATGCAGCATGAATTTGGAATTCTGGCTTCTGAGCCACGGGAAATGTAA 1830 0.4158 MRIPKRLFSFSLSNFSPQLISPLLSSRISFAFGISAKPSRLFPNIASPGASQLHSQSSMDENHDVGIHDSRSVDLPDSDSGKQPRVWSSSPEHGSKTDRGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPSELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDSNPEKIREGVDYARMYKDVRAAVDLCHRDGTLKQMVAKDPGRYINEDNLIVPMLEMLRESGRATFLVTNSLWDYTNTVMNFLCGSTMVGGSNNFEWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARIFTEATNHACQVFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWESRDTRKEDFYLNILMQELQFLRSERDRIEDEVHHLKWSLKFKNPDAKAKQKLSSALDKLELEREKMRLIHQEAQRKLHQRFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLALHSPDKYYRPSEDFMQHEFGILASEPREM* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4185 609 Gene3D - 263 478 IPR023214 -
Mtr3g4185 609 Gene3D - 99 149 IPR023214 -
Mtr3g4185 609 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 45 604 - -
Mtr3g4185 609 Coils Coil 512 539 - -
Mtr3g4185 609 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 103 470 IPR008380 -
Mtr3g4185 609 Pfam 5' nucleotidase family 103 599 IPR008380 -
Mtr3g4185 609 PIRSF NT5C2 78 608 IPR016695 -
Mtr3g4185 609 MobiDBLite consensus disorder prediction 61 78 - -
Mtr3g4185 609 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 45 604 IPR008380 -
Mtr3g4185 609 SUPERFAMILY HAD-like 101 600 IPR036412 -
Mtr3g4185 609 Coils Coil 474 494 - -
Mtr3g4185 609 CDD HAD_cN-II 104 464 - -
Mtr3g4185 609 MobiDBLite consensus disorder prediction 47 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4185 Mtr-Chr3 55761656 55769941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4185 - - mtr:MTR_3g111870 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4185 3 55761656 55769941 Mtr3g4185 3 55761656 55769941 ECH