Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4182 ATGGCTGCAGATGTAGGATGCTGTGGAACTAAATTCTGGCTATACATATTGATGATCATAGGATTAGTATGCTTCGCTGGTCTTATGGCTGGTCTCACTCTTGGACTCATGTCTTTAGGTCTCGTCGACCTTGAAGTTCTCATCAAATCTGGTCGCCCTCAACATCGCATCCATGCCGCCAAAATTTTCCCAGTTGTTAAGAATCAGCATCTTTTGCTTTGTACTCTTTTGATCGGAAATTCCTTGGCCATGGAGACTCTTCCTATTTTTCTTGATGCTATTGTGCCACCCTATGCTGCTGTCTTGATTTCGGTTACCCTAATTCTCATCTTCGGAGAGATATTGCCTCAAGCTGTTTGTACACGATATGGATTGCTGGTTGGAGCTACGCTAGCGCCGCTTGTTCGTGTTCTTCTTTTAGTATTCTATCCCATAGCTTATCCCATAAGCAAGGTGCTTGATCGAATGTTGGGTAAAGGAAAAGCTGCTCTGTTAAAGAGGGCGGAGCTTAAGACTTTTGTGGATTTTCATGGGAATGAGGCTGGGAAAGGAGGAGATTTAACGCATGACGAGACAACCATCATAGCCGGTGCGCTTGAATTGACTGAAAAGACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATTTGGATGCAACTCTAAATTTGGAGACCCTGAATTCAATAATGACAATGGGTCATAGTAGAGTCCCAGTTTATGCGGGAGAGCGGACAAACATTATGGGACTTGTTCTGGTTAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCTCTAAGAAAAATGATCATCAGAAAAATTCCTCGTGTTTCAGAGAATATGCCTCTGTATGATATACTGAACGAATTTCAGAAGGGTCACAGTCATATTGCAGTTGTATATAGGGATCTAAATGATAAAAAAGAAATATCCAAAAAAATTAAGAATGAGGAACAACTAGAGTTCAAGGACAGCTGTAGGAACAAGGGAAAAAGTGCTCCCTTGGATAAAGGTACAGTGTTGGACTCGCACGATACTGTGACTGCTGGTAGCAAGACTGACGGCGGTCCACAAGTGAAAAAAAGTCCACCAGCAACGCCTGCTTTTAAAAAGCGGCATAGAGGTTGTTCATATTGCATTCTGGACCTTGATAATGCTCCCTTGCCCGTGTTTCCACCCAATGAAGTGGTTGTTGGTGTTATTTCAATGGAGGATGTAATCGAAGAGCTTCTTCAGGAGGAGATACTTGATGAAACTGATGAATATGTTAATATCCATAACAAGATTAAAGTTAACATGAATGCTTCTAAGGAGAAGGTTCCTGATGCAAATCTGTTGCAGCCTTCTAATTTAGCAGTTCAAGGACACACACCAACTAATTCGATTTCTACAGCTACTTCTGCAACTGGTTCACCTACCACCATTGATCAAATATCGGAAAGTGAGTCACTCAGGAATCAATGA 1479 0.4178 MAADVGCCGTKFWLYILMIIGLVCFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQHRIHAAKIFPVVKNQHLLLCTLLIGNSLAMETLPIFLDAIVPPYAAVLISVTLILIFGEILPQAVCTRYGLLVGATLAPLVRVLLLVFYPIAYPISKVLDRMLGKGKAALLKRAELKTFVDFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTMGHSRVPVYAGERTNIMGLVLVKNLFMVDSKAAVPLRKMIIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNDKKEISKKIKNEEQLEFKDSCRNKGKSAPLDKGTVLDSHDTVTAGSKTDGGPQVKKSPPATPAFKKRHRGCSYCILDLDNAPLPVFPPNEVVVGVISMEDVIEELLQEEILDETDEYVNIHNKIKVNMNASKEKVPDANLLQPSNLAVQGHTPTNSISTATSATGSPTTIDQISESESLRNQ* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4182 492 MobiDBLite consensus disorder prediction 457 492 - -
Mtr3g4182 492 Gene3D - 189 324 IPR046342 -
Mtr3g4182 492 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Mtr3g4182 492 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 477 IPR045095 GO:0010960
Mtr3g4182 492 MobiDBLite consensus disorder prediction 332 372 - -
Mtr3g4182 492 SUPERFAMILY CBS-domain pair 194 417 IPR046342 -
Mtr3g4182 492 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Mtr3g4182 492 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Mtr3g4182 492 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4182 Mtr-Chr3 55728365 55733415 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4182 K16302 - gmx:100804572 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4182 3 55728365 55733415 Mtr3g4182 3 55728365 55733415 ECH