Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4172 ATGCCCGTAGCCACTAAGCTTCAATCTCATGCTAAACCGGTTACTGAACCGCGAGCTCGAGCTATTCTGAAACCAGGCGGAAACATAGTAACAGTTCATGAAGAAACAACAAAACGTAAGAAGGAGAATTTGAAGAAGAAAACACAGGTTCCAAAGATACAAGAGCGGGAAATTTCTGATTCTGTTGTGGGAAATAACAACGTCTCTTTGGACAGCACATGTTCCTCGGATTCCTCTTCAGGAAATTCATTGGTGAAAAAGGTCAACTCTGAGAATGGAAATGGAAGTGCAAAGATGAAGCGCAATAACGGGTTTAAGCCAGTGAGGATTGTCCCAGATGCTTCCCACGTGTCTCCGCCTCATAAGACCTCGGCACCGTCCAAGAGATGTGATTGGATCACACCAAATGCTGACCCTCTTTATACTGCTTTCCATGACGATGAATGGGGTGTTCCAGTTCTTGATGATGATAGAAAGCTATTTGAGCTTCTAGTATTTTCACAGGCATTAGCAGAACACACTTGGCCAACAATCCTTAACCACAGAGACATATTCAGGAAGCTTTTTGAAAATTTTGACCCATCCTCAATTGCACAATTTACTGAGAAGAATTTGGTAACACCAAAATTAAATGGCAACCCTTTGTTATCAGAACAAAAGCTACGTGCTGTTGTGGAAAATGCTAAACAATTCCTTAAGATTCAGCTGGAGTTTGGTTCATTCAGCAATTACTGCTGGAAATTTGTTAACAACAAACCAATAAAAAATGAATTTCGATATGGGCGTCAAGTACCTGTGAAGAATCCAAAAGCAGAACTCATTAGCAAGGATATGATGCGCAGAGGTTTCCAATGTGTTGGACCAAAAGTTGTTTATTCCTTCATGCAAGTAGCAGGACTCGTTAATGATCACCTAATAACATGCTTCAGGTACCAAGAATGCAACGTGGCAATCAAAACCGAAATTAAAACTGAGGTTAAGGAAATAAAGGTATAA 996 0.4056 MPVATKLQSHAKPVTEPRARAILKPGGNIVTVHEETTKRKKENLKKKTQVPKIQEREISDSVVGNNNVSLDSTCSSDSSSGNSLVKKVNSENGNGSAKMKRNNGFKPVRIVPDASHVSPPHKTSAPSKRCDWITPNADPLYTAFHDDEWGVPVLDDDRKLFELLVFSQALAEHTWPTILNHRDIFRKLFENFDPSSIAQFTEKNLVTPKLNGNPLLSEQKLRAVVENAKQFLKIQLEFGSFSNYCWKFVNNKPIKNEFRYGRQVPVKNPKAELISKDMMRRGFQCVGPKVVYSFMQVAGLVNDHLITCFRYQECNVAIKTEIKTEVKEIKV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4172 331 Gene3D Hypothetical protein; domain 2 127 312 - -
Mtr3g4172 331 MobiDBLite consensus disorder prediction 59 99 - -
Mtr3g4172 331 Pfam Methyladenine glycosylase 136 310 IPR005019 GO:0006284|GO:0008725
Mtr3g4172 331 PANTHER OS04G0501200 PROTEIN 1 330 - -
Mtr3g4172 331 SUPERFAMILY DNA-glycosylase 128 314 IPR011257 GO:0003824|GO:0006281
Mtr3g4172 331 MobiDBLite consensus disorder prediction 33 54 - -
Mtr3g4172 331 MobiDBLite consensus disorder prediction 1 103 - -
Mtr3g4172 331 PANTHER DNA GLYCOSYLASE SUPERFAMILY PROTEIN 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4172 Mtr-Chr3 55640846 55643490 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4172 K01246 - gmx:100306457 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4172 3 55640846 55643490 Mtr3g4172 3 55640846 55643490 ECH