Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4170 ATGATTGAAGCAATGGAAAGTTCAGTTAACGGTGGTGGTGGTTTCGCGACTCATTTGCAAAGCTTTGGTGGTGGTGGTGGTGATAGTAGTGAAGAGGAACTGTCTGTGTTACCTCGTCATACTAAGGTTGTTGTTACTGGAAATAACCGTACAAAATCGGTTCTTGTTGGTCTTCAAGGTGTTGTTAAGAAAGCTGTTGGATTAGGTGGTTGGCATTGGCTGGTTCTTACTAATGGAATTGAAGTGAAGCTGCAAAGGAATGCTCTTAGTGTGATTGAAGCACCCACTGGCAACGAAGAAGATGATGACCTTGAATTTGATAACGTGCAATGGAATGGATCAGATATGGCATCAGACGATACACACAAGTCTCACAAATCGAGGCACAGAATGCATAGATCATTGGGATCATGTCACAAGACCATGAGTAGGTCCTTCTCTGGTGATTCACAGTCTAAGGGGTCCGTTACTATGCCTCATGGGTCCACGAAAGTTGACTTGAGCAAACTTGAAATGGCTGCATTGTGGAGATATTGGAGACATTTTAATCTTGTGGATGTCGTCCCAAACCCATCAAAGGAGCAGCTAGTAGATGTTGTTCAGAGGCATTTCATGTCCCAGCTGCAAATGGACGAGTTGCAGGTCATTAAGGGATTTGTCAATGCTGCAAAGAGGATCAAGACTGTGTGCAAATGA 696 0.4382 MIEAMESSVNGGGGFATHLQSFGGGGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSTKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLVDVVQRHFMSQLQMDELQVIKGFVNAAKRIKTVCK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4170 231 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 170 224 IPR025718 GO:0005515
Mtr3g4170 231 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 231 - -
Mtr3g4170 231 PANTHER SAP30 1 231 IPR024145 -
Mtr3g4170 231 MobiDBLite consensus disorder prediction 115 162 - -
Mtr3g4170 231 MobiDBLite consensus disorder prediction 138 162 - -
Mtr3g4170 231 Gene3D - 145 231 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4170 Mtr-Chr3 55626316 55629879 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4170 - - gmx:100809195 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4170 3 55626316 55629879 Mtr3g4170 3 55626316 55629879 ECH