Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4159 ATGACAACAATGCCCGATCAAGCCACTAGCATATGCCCTCACTGTGATCGGGCTATCCCAGCTGCAAATATTGATTTGCACTCTGTTCATTGCGCTCGGAATCTTGAAAAATGCAAGCTTTGTGGTGATATGGTACCAAAGATACATGCTCAAGATCACTATTTAAACACCCATGCACCGGTTGCCTGTTCATTGTGCAGTGAAACAATGGAGCGCAATATTTTATATATCCACGAAGGTGAAAGTTGCCCCCAGAGGATTGTCACCTGTGAGTTCTGTGAGTTTCCATTGCCTGCAATTGATCTGCCAGAGCATCAGGAAGTATGTGGGAATCGAACAGAGATGTGTGACCTCTGTAACAAATATGTCAGACTACGTGAAAGATACAATCATGAATTCAATTGCAACGGAATACAAGACAATGCTGCAGGGTCTTCAAGGAATGAGAGGCCAGCTGAAAGAGATGCGAACGAATCCTCAAAAAGACGTCTTTTTTTCACAATAGCTATAACTGGTATTGCCGTCATACTCGGATCTATTTTTATTCAGAGAAAGGCAGAACCCAGTAATGTGCATTAG 579 0.4283 MTTMPDQATSICPHCDRAIPAANIDLHSVHCARNLEKCKLCGDMVPKIHAQDHYLNTHAPVACSLCSETMERNILYIHEGESCPQRIVTCEFCEFPLPAIDLPEHQEVCGNRTEMCDLCNKYVRLRERYNHEFNCNGIQDNAAGSSRNERPAERDANESSKRRLFFTIAITGIAVILGSIFIQRKAEPSNVH* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4159 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 58 IPR013083 -
Mtr3g4159 192 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 4 192 - -
Mtr3g4159 192 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 4 192 - -
Mtr3g4159 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 111 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4159 Mtr-Chr3 55484083 55487542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4159 - - gmx:100811867 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3103 8 41598946 41599614 Mtr3g4159 3 55484083 55487542 PCT