Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4144 ATGGCGTCATTCCGACGGACGTTATCTCCGGCGTATCACGACCGTCACTATATAAACGGCGATGGTACCGCCTTTTCACCGTCGTCTCCATCTCACAAACTTCCATCTTCAAACACAAACTACTCTGCAATAGCGTCGTCGTTTCAGAGATTAATCGGTGGCGTTTTCATGCGACGCTACAATCGAAAGGGACAATGGCGAAAAGTTGCTTTCAGGTGCGTTCTTTGTTTCTTCGTTGGGTTTTTATTAGGTATGTTCCCTTTCGGTAATCTCATTCATGAAATTCCTCAACAACAACGTGAAAACAACGACAATATCATTGCTTTTGATATCAATAAAACTCCACAATCTGATGCCAAATCAATTCTCAATAATCGCGTTTTGAAAAAGCACGTTAGCGTCGGTGGTGGTGACGCCGACGACGAGGATGAGGATAAGAAGGGTAAGGGTTTTATGATTGAACAAGTAAGTTTGAGCTCAAATATGAACGCTGAGAAGGATAATGAAAATCTGAAAGAGAGGGAATTGGGTGAATCTGAGAAAATTGATATTGTGGCGAGGAAGCAATTGATTATTGTGACACCGACTTATAACCGCTCCTTTCAGTCGTATTTTTTGAATAGGTTAGGACAGGTTTTGAGGTTGGTGCCGCCGCCGCTTTTATGGGTGGTGGTGGAAATGAATTCTGCTTCTATGGAAACTGCTGAATTGTTGAGGAAAACGGGTGTGATGTATAGGCATTTGGTGTGTACTAAGAATTCAACGGATGTGAAGGATAGAGGAGTTCATCAGAGAAATAAAGCGTTGGAGCATATTGAACATCATAAACTTGATGGGATTGTTTACTTTGCTGATGATGATAATGTGTATTCTCTTGACTTGTTTCAGACAATCAGAGATATCAGTCGTTTTGGCACTTGGCCTGTCGCCATGCTTGCACCAAGCAAGAACAAGGCTATTTTGGAGGGTCCGGTATGCAATGGAAGCCAAGTGCTTGGGTGGCATACAAATGAGAAAAGTAAAAGACTTCGAAGATTTCATGTTGATATGTCTGGGTTTGCATTCAACAGCACAATCCTGTGGGATCCAAAGCGGTGGCGGCGCCCTACTTCAAATCCTATACGGCAATTAGACTCGGTGAAAGAGGGTTTTCAGGAGACCACCTTTATTGAACAATTGGTGGAAGATGAGAGTCAAATGGAAGGTTCGCCACCTGGTTGCAAGAAAATAATGAATTGGCATCTTCATTTGAATGTTCATAATATAGTTTATCCAAAGGGTTGGATGCTTGAGAAAAACCTAGATGCTGTCATCCACATCAAGTAA 1326 0.4223 MASFRRTLSPAYHDRHYINGDGTAFSPSSPSHKLPSSNTNYSAIASSFQRLIGGVFMRRYNRKGQWRKVAFRCVLCFFVGFLLGMFPFGNLIHEIPQQQRENNDNIIAFDINKTPQSDAKSILNNRVLKKHVSVGGGDADDEDEDKKGKGFMIEQVSLSSNMNAEKDNENLKERELGESEKIDIVARKQLIIVTPTYNRSFQSYFLNRLGQVLRLVPPPLLWVVVEMNSASMETAELLRKTGVMYRHLVCTKNSTDVKDRGVHQRNKALEHIEHHKLDGIVYFADDDNVYSLDLFQTIRDISRFGTWPVAMLAPSKNKAILEGPVCNGSQVLGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTSNPIRQLDSVKEGFQETTFIEQLVEDESQMEGSPPGCKKIMNWHLHLNVHNIVYPKGWMLEKNLDAVIHIK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4144 441 PANTHER GLYCOSYLTRANSFERASES 1 102 - -
Mtr3g4144 441 PANTHER GLYCOSYLTRANSFERASES 184 438 - -
Mtr3g4144 441 SUPERFAMILY Nucleotide-diphospho-sugar transferases 189 434 IPR029044 -
Mtr3g4144 441 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 184 438 IPR005027 GO:0015018|GO:0016020
Mtr3g4144 441 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 102 IPR005027 GO:0015018|GO:0016020
Mtr3g4144 441 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 189 436 IPR029044 -
Mtr3g4144 441 Pfam Glycosyltransferase family 43 209 417 IPR005027 GO:0015018|GO:0016020
Mtr3g4144 441 CDD GlcAT-I 190 417 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4144 Mtr-Chr3 55299726 55303146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4144 1 441 Glycosyltransferase AT1G27600 55.180 9.61e-171 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4144 K20869 - gmx:100809892 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4144 3 55299726 55303146 Mtr3g4144 3 55299726 55303146 ECH