Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4143 ATGTGTAAACCTAAGCCATCCCCATTTCTCTGTCCCACACAAACCAACCTCATAACTTCTGATCCTAAACTACTCATAAATGACCCTCCTCATGATGAAGTTCAAGATCAAAATGAACTTCAAAGATGGCCAACTCCAAATGAGGTGATAGAAGAATTGAAGGCCATAGGTAAAATATCAGGTCCAACAGCTATAACTGGTTTACTCTTATATTCAAGAGCTATGATCTCTATGCTTTTCCTTGGCTATCTCGGCGAGACAGAACTAGCAGGAGGTTCTCTCTCCATAGGTTTTGCAAACATAACTGGTTATTCTGTCCTATCTGGTTTAGCCATGGGAATGGAACCCATTTGTGGACAAGCTTATGGAGCTAAACAATGGAAGATACTTGGCTTAACTCTTCAAAGAACCGTTCTTTTACTTCTTTCCACTTCCATTCCCATTGCATATTTATGGCTTAACATGAAAAAGATTCTCATGTCTTGTGGTCAAGATGAAGAAATTTCATCAACAGCACAAACTTTCATTCTCTTTTCACTACCAGATCTTTTCTTTCTCTCGTTTCTTCATCCTCTTCGTATTTACCTAAGAACACAAAATATAACATTGCCATTAACGTATTGTTCAGCCATATCTGTTACTCTTCATGTTCCTTTGAATTTTCTTCTTGTGATCCATTTCAAAATGGGTGTTGCAGGGGTGGCAATAGCAATGATTTGGTTCAATCTCAACCTTTTGATTTTCCTTTCATCTTTTGTATTTTTCTCACGTGTTTATAAAGATTCATGGGTTTTTCCTAGTATTGATTGTCTCAAAGGTTGGTCTTCGTTACTTGCGCTTTCGATTCCGTCGTGTGTTTCTGTTTGTTTAGAATGGTGGTGGTATGAACTCATGATAATTTTGTGTGGACTTTTGGTCAACCCAAAGTCAACCATTTCTTCAATGGGTATTCTTATTCAAACAACTTCTTTGGTTTATGTTTTTCCATCTTCTCTTAGTTTTGGTGTTTCAACTAGAGTTGGGAATTTGTTAGGTGCTAATTCTCCTTCAAAAGCACGTTTTTCTATGATAGTCTCAATGTTTTGTGGTTTTGGTTTGGGAATTTTGGCTATGGTTTTTACTACTTTGATGAGAAATCAATGGGGGAGATTGTTTACTAGTGATGACGAGATTATTAATCTAACGGCTATGGCTTTGCCAATTGTTGGGCTTTGTGAGATTGGGAATTGCCCACAAACAACGGGTTGTGGTGTTTTAAGAGGTAGTGCTAGACCTACGGTAGGTGCAAATATCAATTTGGGGTCTTTTTATTTGGTAGGTATGCCTGTGGCTATTGTTCTTGGGTTTGTTGTGAAGATGGGTTTTGTTGGGCTTTGGTTTGGGTTACTTGCAGCCCAAGGCTCTTGTGCTATTCTCATGTTGTATGTGCTTTGTACAACGGATTGGAATGATCAAATTGAAAGAGCAAAGAATCTCACAAAAGCTACTACTACCATTGGTTTTTCTGATTCTACTACATTCATCACAAAAACAGTACTGCGTCATGATAACAACAACAATAAATGTGGTTGTCTTGAAGAGATCATAGTAATCACACATGATGATGCTACCAAGACATGTACACACTCACTTGAATCAGACCCACTGCTACCAAACATGTAG 1662 0.3803 MCKPKPSPFLCPTQTNLITSDPKLLINDPPHDEVQDQNELQRWPTPNEVIEELKAIGKISGPTAITGLLLYSRAMISMLFLGYLGETELAGGSLSIGFANITGYSVLSGLAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLSTSIPIAYLWLNMKKILMSCGQDEEISSTAQTFILFSLPDLFFLSFLHPLRIYLRTQNITLPLTYCSAISVTLHVPLNFLLVIHFKMGVAGVAIAMIWFNLNLLIFLSSFVFFSRVYKDSWVFPSIDCLKGWSSLLALSIPSCVSVCLEWWWYELMIILCGLLVNPKSTISSMGILIQTTSLVYVFPSSLSFGVSTRVGNLLGANSPSKARFSMIVSMFCGFGLGILAMVFTTLMRNQWGRLFTSDDEIINLTAMALPIVGLCEIGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPVAIVLGFVVKMGFVGLWFGLLAAQGSCAILMLYVLCTTDWNDQIERAKNLTKATTTIGFSDSTTFITKTVLRHDNNNNKCGCLEEIIVITHDDATKTCTHSLESDPLLPNM* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4143 553 PANTHER PROTEIN DETOXIFICATION 31 506 - -
Mtr3g4143 553 Pfam MatE 62 222 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr3g4143 553 Pfam MatE 283 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr3g4143 553 TIGRFAM matE: MATE efflux family protein 68 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr3g4143 553 CDD MATE_eukaryotic 52 488 IPR045069 GO:0042910|GO:1990961
Mtr3g4143 553 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4143 Mtr-Chr3 55281276 55283753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4143 K03327 - gmx:100788339 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4143 3 55281276 55283753 Mtr3g4143 3 55281276 55283753 ECH