Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4130 ATGGATCCCTGTCCGTTCGTTCGTCTAACCATCGGAAACCTCGCCCTTAAAATCCCTGTCGCCTCCAAACCTGCACGCTCCGTCGTGCATCCTTCATCTTCACCGTGTTTCTGCAAGATAAAACTCAAGAACTTTCCTCTACAAACTGCTCTTGTCCCCTTCATCCCTCACGAGAATAATTCCCCTGACTCACAAATCCAACCGATTGCCGCTTCTTTTCATCTCAGTAAGGCTGATCTTGACAGGCTCACCGGAAAATCCATATTCGCCAAGAAACTTACCCTCAAAATTGCGATCTACACCGGTCGGAGTGGCACCACATGCGGTGTTAACTCCGGGAGACTTCTCGGAAAAGTCTCCGTTCCGTTGAACCTCACCGGTACTCTAACGAAGGCCACTGTTTTCCATAATGGATGGATTACGGTTGGGAAGGATGATAAAGGCGGTTCTGCACAGTTTCACCTCAATGTTAAGGCCGAACCTGATCCTAGGTTCGTATTCCAGTTCGACGGCGAGCCAGAATGCAGTCCTCAGGTTTTTCAGATCCAAGGCAATATTTCACAACCTGTCTTCACGTGCAAGTTCAGTTTTAGAAACAACAGTGGTGACCGGAATCAACGTTCTAGATCAATGCAATCAGAGGTAGGAGCTTCTAGAAGCTGGTTAAGTTCATTCGGAAGTGAACGTGAACGTACAGGGAAAGAACGCAAAGGATGGTCCATTACGGTTCACGACCTTTCCGGTTCACCGGTTGCAGCTGCTTCAATGGTCACACCTTTCGTTGCATCTCCCGGGTCAGACCGGGTTAGCTGCTCAAATCCCGGTTCATGGCTTATTCTTCGTCCTGGTGATGGTACATGGAAGCCTTGGGGAAGACTGGAAGCGTGGCGCGAACGCGGTGGCTCTGATGGTCTTGGTTACCGGTTTGAACTTATGCCGGACACTAACGGTAGCATGAGTGCTGGTGGTATTGTCATTGCAGAGTCAACGTTGAGTTTGACTAGAGGAGGGAAGTTTGTTCTTGATTTGAGTAGCCGTTGTGGAGGAGGTGGTGGTTCTAACGGTCGTGCGACGCCGGGAAACGCGACGTCGCCGGTTTGTAGTCCAAGGGGAAGTGGTGATTATGGTTATGGGCTATGGCCTTATTGTATGTATAGAGGGTTTGTGATGTCGGCGAGTGTAGAAGGTGAGGGAAGGTGCAGCAAACCTACGGTGGAGGTGAGTGTGCCGCACGTGAATTGCACGGAGGATGCTGCTGCTTTTGTAGCTTTAGCTGCAGCCGTTGATTTAAGTGTGGATGCTTGCAGGCTATTCTCTCAACGGTTAAGGAAAGAGCTTTGTCAGCAAATGGATTTAGTTGGATGA 1365 0.4967 MDPCPFVRLTIGNLALKIPVASKPARSVVHPSSSPCFCKIKLKNFPLQTALVPFIPHENNSPDSQIQPIAASFHLSKADLDRLTGKSIFAKKLTLKIAIYTGRSGTTCGVNSGRLLGKVSVPLNLTGTLTKATVFHNGWITVGKDDKGGSAQFHLNVKAEPDPRFVFQFDGEPECSPQVFQIQGNISQPVFTCKFSFRNNSGDRNQRSRSMQSEVGASRSWLSSFGSERERTGKERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRVSCSNPGSWLILRPGDGTWKPWGRLEAWRERGGSDGLGYRFELMPDTNGSMSAGGIVIAESTLSLTRGGKFVLDLSSRCGGGGGSNGRATPGNATSPVCSPRGSGDYGYGLWPYCMYRGFVMSASVEGEGRCSKPTVEVSVPHVNCTEDAAAFVALAAAVDLSVDACRLFSQRLRKELCQQMDLVG* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4130 454 PANTHER OS07G0133500 PROTEIN 1 450 - -
Mtr3g4130 454 Pfam Protein of unknown function (DUF1005) 1 447 IPR010410 -
Mtr3g4130 454 PANTHER OS08G0163500 PROTEIN 1 450 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4130 Mtr-Chr3 55097275 55099827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4130 - - gmx:100805268 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4130 3 55097275 55099827 Mtr3g4130 3 55097275 55099827 ECH