Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4121 ATGGCGTCAAGCGAATCTAATTCACAGATGAAGGTCGTCCATGGCGATGCTGGTTACATACTCGAAGACGTTCCTCATCTCTCCGACTACGTTCCAAATCTTCCTACATATCCTAATCCACTTCGATCTAATCCAGCTTACTCGGTTGTTAAGCAGTATTTCGTGCATATGGATGACACCGTTCCTCAGAAGGTTGTTGTTCACAAAGATGGCCCAAGAGGTGTTCATTTTCGACGTGCAGGACCTCGACAAAAGGTATATTTTAGATCAGATGATGTCATTGCTTGTATTGTCACATGTGGTGGTCTCTGCCCTGGCCTCAACACTGTCATAAGGGAAATTGTGTGCGGTCTTTCTTACATGTACGGTGTCGACAAAGTCCTTGGCATAGATGGTGGTTATAGAGGTTTTTATTCGAAGAACACCATTACTTTAACTCCTAAAGTGGTCAATGACATCCATAAGCGTGGAGGAACGATTCTTGGGACATCCCGAGGGGGGCATGATACTGGCAAGATAGTTGACAGCATCCAGGATCGGGGAATTAATCAGGTTTATATCATTGGAGGAGATGGAACACAGCGAGGAGCTGCTGTGATTTATGAGGAAGTTAGACGGCGGGGTCTGAAAGTAGCAATTGCTGGTATTCCAAAAACCATAGATAATGACATCCCGGTTATCGACAGGTCCTTTGGTTTTGATACTGCAGTTGAGGAGGCTCAACGTGCCATTAACGCAGCACATGTTGAGGCTGAAAGTGTTGAGAATGGCATTGGTGTTGTAAAGCTAATGGGTCGTTATAGTGGTTTTATTGCGATGCATGCTACACTTGCTAGTAGAGATGTGGACTGTTGCTTGATTCCAGAGTCACCCTTCTACCTTGAAGGGAAGGGTGGACTTTATGAATTTATTACGAAAAGGCTGAAAGAAAGTGGACATATGGTCATAGTCATAGCTGAGGGAGCAGGACAAGATCTGCTTACAGAAAGCATGCAAGACATGGACCAGAAGGATGCTTCTGGAAACAAGCTACTTCAAGATGTTGGTTTATGGATATCTCATAAGATCAAGGATCATTTTGCAAAGGAGAATAAGATGGCCATTGTTCTTAAATATATAGATCCAACTTACATGATCCGGGCAATTCCAAGCAATGCATCAGACAGTGTCTACTGCACACTTCTTGCTCAGAGTGCAGTTCATGGTGCAATGGCTGGGTATACTGGATTCACTGCTGGACTTGTGAATGGCAGACATACTTATATTCCATTCAACAGAATCACCGAGAAGATGAACAACGTTGTGATTACTGACAGAATGTGGGCAAGAATGCTTTCTTCAACAAACCAGCCAAGCTTTTTGAAACCCAAAGATGTTCATCAAATAATGAAAGCAGGACAATCCCCAACTCAGTTGTTAGAAGGGAGCAATTGCAATGGTGGCGGTGAGGAAGCGAAGAAAGTAGAGCAAATTCCCACTCAGTTGATGGAAGGGGACAAGAGCAAAGATAATCAAAAATCAAGAAACCTCGCTGACAGTGACAGTTGTATCAAGAAATAA 1560 0.4346 MASSESNSQMKVVHGDAGYILEDVPHLSDYVPNLPTYPNPLRSNPAYSVVKQYFVHMDDTVPQKVVVHKDGPRGVHFRRAGPRQKVYFRSDDVIACIVTCGGLCPGLNTVIREIVCGLSYMYGVDKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTGKIVDSIQDRGINQVYIIGGDGTQRGAAVIYEEVRRRGLKVAIAGIPKTIDNDIPVIDRSFGFDTAVEEAQRAINAAHVEAESVENGIGVVKLMGRYSGFIAMHATLASRDVDCCLIPESPFYLEGKGGLYEFITKRLKESGHMVIVIAEGAGQDLLTESMQDMDQKDASGNKLLQDVGLWISHKIKDHFAKENKMAIVLKYIDPTYMIRAIPSNASDSVYCTLLAQSAVHGAMAGYTGFTAGLVNGRHTYIPFNRITEKMNNVVITDRMWARMLSSTNQPSFLKPKDVHQIMKAGQSPTQLLEGSNCNGGGEEAKKVEQIPTQLMEGDKSKDNQKSRNLADSDSCIKK* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4121 519 MobiDBLite consensus disorder prediction 499 519 - -
Mtr3g4121 519 MobiDBLite consensus disorder prediction 470 519 - -
Mtr3g4121 519 PRINTS ATP-dependent phosphofructokinase family signature 97 116 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mtr3g4121 519 PRINTS ATP-dependent phosphofructokinase family signature 181 197 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mtr3g4121 519 PRINTS ATP-dependent phosphofructokinase family signature 214 231 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mtr3g4121 519 PRINTS ATP-dependent phosphofructokinase family signature 232 250 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mtr3g4121 519 PRINTS ATP-dependent phosphofructokinase family signature 253 269 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mtr3g4121 519 PRINTS ATP-dependent phosphofructokinase family signature 310 322 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mtr3g4121 519 PIRSF ATP_PFK_TP0108 1 458 IPR012004 GO:0003872|GO:0005524|GO:0006096
Mtr3g4121 519 Gene3D - 90 279 - -
Mtr3g4121 519 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 24 454 IPR012004 GO:0003872|GO:0005524|GO:0006096
Mtr3g4121 519 Coils Coil 237 257 - -
Mtr3g4121 519 Pfam Phosphofructokinase 96 401 IPR000023 GO:0003872|GO:0006096
Mtr3g4121 519 PANTHER - 1 481 - -
Mtr3g4121 519 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 481 - -
Mtr3g4121 519 SUPERFAMILY Phosphofructokinase 28 464 IPR035966 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4121 Mtr-Chr3 54973829 54979503 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4121 K00850 - gmx:100818755 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4121 3 54973829 54979503 Mtr3g4121 3 54973829 54979503 ECH