Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4114 ATGAAGGAGATTATGGAAGTGGAATCTGGTGTTACAACTCCAAGTGCTCTTCTTGATGATGATGGCAGAACCAAACGAACTGGAACAGTATGGACTGCGAGTGCACATATCATAAACGCAGTTATTGGGACTGGAGTGCTGTCCTTACCATGGGCTATGTCCCAAATGGGTTGGGGTCTTGGAATATCCTGCATTTTCATCTTTGCTGGTGTTACACTCTACACTTCAAATCTTCTTGCTGATTGTTATAGATCACCTGATCCTGTTACTGGCAAGAGAAACACAACTTACATGGAAGCTGTCAAAACTCACTTAGGTGGAAAACAACACGTGTTTTGTGGATTGGTCCAATATGGCAACCTTGCTGGCTTTACTATTGGCTTCATCATAACAACATCTACAAGTATAGTGACGATACTTAAAAACAATTGCTTCCGGAAGAATGGGTTTGAAGCTCCATGCCGTTTTTCTAATAATCCATACATGATTGGTATTGGAATAATTGAAATAATATTATCTCAAATCCCCAATTTTCACAAGTTATCTGTGCTATCAATCATAGCAGCTTCCATGGCTTTCGGCTACGCATCCATCGGTGTTGGACTTTCACTTACTACCGTTATCCAAGGGAATGTAAAGAGCACATCATTTTCGGGAAGCAACAAGGGGCGTAGTTCAGCAGATATAGCATGGAATATCCTTGTTGCAATTGGAGACATTGCACTTGCCAGTGCCTACACTCAAATTGCAGTAGATATACAAGATAGTCTGAAATCATCACCTCCAGAAAATAAAGTGATGAAGAGGGCAAACATGATTGGTATATTCACTATGACAATTTTCTTCTTGTTGAATGCATGTGCTGGATATGCTGCATTTGGCTCAAACACTCCTGGTAACATACTCATGAGCTCTGGCTTTCACAAGCCCTTCTGGCTATTGGAATTGGCCAATGTCTTCATAATTGTGCACCTTCTAGGAGCATTTCAGGTAATAGTTCAACCTTTATTTCGTATAGTGGAAATGTTGGCTGCCCAAAAGTGGCCAGACTCAAGTTTCATAACAAGGGAAATTCCAATGAAGATTGGCCAAATAAAATACACCATCAACCTCTTTAGGTTAGTTTGGAGGACTACATTTGTTGTGGTGGTAACTGTTCTAGCCATGGCAATGCCCTTTTTCAATGACATGATTGCCCTTCTTGGTGCCCTTGGGTTTTGGCCTTCAGTGGTGTATTTTCCGGTGGAGATGTACATTGTGAGACAAAAGATCAGAAAAGGAACATTTCGTTGGTTTGGGCTTCAAACATTGAGCCTTTTCTGTTTACTTGTGTCATTGGCTGCAGCAATTGGAGCTATTCATGGGTTGAGTCAAGCTATTGGCAAATATAAACCTTTTATGTATAAGGCATAG 1413 0.4084 MKEIMEVESGVTTPSALLDDDGRTKRTGTVWTASAHIINAVIGTGVLSLPWAMSQMGWGLGISCIFIFAGVTLYTSNLLADCYRSPDPVTGKRNTTYMEAVKTHLGGKQHVFCGLVQYGNLAGFTIGFIITTSTSIVTILKNNCFRKNGFEAPCRFSNNPYMIGIGIIEIILSQIPNFHKLSVLSIIAASMAFGYASIGVGLSLTTVIQGNVKSTSFSGSNKGRSSADIAWNILVAIGDIALASAYTQIAVDIQDSLKSSPPENKVMKRANMIGIFTMTIFFLLNACAGYAAFGSNTPGNILMSSGFHKPFWLLELANVFIIVHLLGAFQVIVQPLFRIVEMLAAQKWPDSSFITREIPMKIGQIKYTINLFRLVWRTTFVVVVTVLAMAMPFFNDMIALLGALGFWPSVVYFPVEMYIVRQKIRKGTFRWFGLQTLSLFCLLVSLAAAIGAIHGLSQAIGKYKPFMYKA* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4114 470 PANTHER OS05G0424000 PROTEIN-RELATED 15 463 - -
Mtr3g4114 470 Pfam Transmembrane amino acid transporter protein 26 456 IPR013057 -
Mtr3g4114 470 PANTHER ACID TRANSPORTER, PUTATIVE-RELATED 15 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4114 Mtr-Chr3 54926269 54935865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4114 8 466 Organic Solute Cotransporters AT1G58360 53.648 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4114 K24917 - gmx:100804643 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4114 3 54926269 54935865 Mtr3g4114 3 54926269 54935865 ECH