Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4113 ATGGAGGCTGAAAAGGATGTGTCTATCAAACAGTACACAAATGAGGAAGTGGATGATGATGGAAGAATCAAGAGAACCGGGAACGTGTTGACGGCAACAACACACATAATAACAGTGGTGGTGGGTGCAGGAGTGTTGGCTCTAGCATGGGCAATTTCTCAACTAGGATGGATAGCTGGCATACTTGTTATGATCACATTTTCATCCATTTCCATTTACACTTACAATCTTATAGCTGATTGTTATAGATATCCAGACTCAGTTAATGGCAAGAGAAACTACACTTATATGCAGGCCGTTCATGCTTACCTAGGTGGAATAATGCACGTATTTTGTGGATTGATCCAGTATGGGAAACTCGCTGGGATTACAGTGGGCTACACTATAACTTGCTCTACAAGCATGGTGGCTATAAAGAAATTGATTTGCTTCCACAAAAATGGCCATGAAGCTTATTGCAAGTTTTCAAATAATCCCTACATGCTCGGTTTTGGGATCTTTCAGATTTTATTGTCTCAAATCCCAAATTTCCATAAGTTAACATTGATATCAACTGTTGCTGCTATTACCTCTTTTGGTTATGCATTAATTGGAAGTGGACTCTCTCTAGCAGTTGTGGTGTCAGGGAAAGGAGAAACAACCAGTTTGTTTGGAACCAAAGTAGGACCAGGATTGTCAGAAGATGACAAAATTTGGAAAGTTTTGACTGCTTTGGGAAACATTGCACTTGCTTGCTCTTATGCTACTGTTGTCTATGATATAATGGACACATTAAAGTCAAATCCACCGGAAAGCACACAGATGAGGAAGGCAAATATGTTGGGGATCACTACAATGACAATACTTTTCCTCCTATGTGGTTCACTTGGCTATGCTGCATTTGGTGATCACACCCCAGGGAACATCCTCACTGGTTTTGGATTTTATGAGCCCTTCTTGTTGGTTGCTTTGGGGAATGTATGCATTATAGTCCATATGGTGGGAGCATATCAGGTTTTAGCTCAACCAATATTTCGTATAGTTGAAATGGGTGCTAACATGATGTGGCCACAATCATCTTTCATACATAAGGAATACCCAAACAAAATTGGTTCTTTAACATTCAACATCAACTTATTTAGACTAATTTGGAGGACAATATTTGTGATAATGGCCACAGTTATTGCCATGGCAATGCCATTCTTCAACGAGTTTCTTGCATTACTTGGAGCATTTGGATTTTGGCCACTCATCGTCTTCTTCCCGATACAAATGCACATCTCTCAGAAACATATAAACAGATTTTCATTGAAGTGGTGTGTGCTCCAACTATTGAGTCTTGTTTGTTTTTTTGTTTCAGTAGCTGCTGCAGTTGGTTCCATTCATGGAATTAGTAAGAATATCACAAAATACAAACTCTTCATGTATAAACAATAG 1416 0.3912 MEAEKDVSIKQYTNEEVDDDGRIKRTGNVLTATTHIITVVVGAGVLALAWAISQLGWIAGILVMITFSSISIYTYNLIADCYRYPDSVNGKRNYTYMQAVHAYLGGIMHVFCGLIQYGKLAGITVGYTITCSTSMVAIKKLICFHKNGHEAYCKFSNNPYMLGFGIFQILLSQIPNFHKLTLISTVAAITSFGYALIGSGLSLAVVVSGKGETTSLFGTKVGPGLSEDDKIWKVLTALGNIALACSYATVVYDIMDTLKSNPPESTQMRKANMLGITTMTILFLLCGSLGYAAFGDHTPGNILTGFGFYEPFLLVALGNVCIIVHMVGAYQVLAQPIFRIVEMGANMMWPQSSFIHKEYPNKIGSLTFNINLFRLIWRTIFVIMATVIAMAMPFFNEFLALLGAFGFWPLIVFFPIQMHISQKHINRFSLKWCVLQLLSLVCFFVSVAAAVGSIHGISKNITKYKLFMYKQ* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4113 471 PANTHER OS05G0424000 PROTEIN-RELATED 2 466 - -
Mtr3g4113 471 Pfam Transmembrane amino acid transporter protein 26 457 IPR013057 -
Mtr3g4113 471 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 2 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4113 Mtr-Chr3 54918547 54923061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4113 15 467 Organic Solute Cotransporters AT1G10010 53.304 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4113 K24917 - gmx:100802090 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4113 3 54918547 54923061 Mtr3g4113 3 54918547 54923061 ECH