Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4106 ATGGATCGCTTGCGTCCTCGCAACAGACCCATTTTTTCCGGATTCACCAATTCTGAGATTGAGAGAATGGAAAAATTACTAAGGGAATCATCAAAAGGACAATCATTCACCCTCGATTTTTACCAAAAACTAGCCAAAAGTTTCAACTTATCATCTGGTCGTGCTGGGAAACCTGTCATCAAATGGACTGAGATACACAGTTGGTTTCAGACTAGACTCCAAGACTCACCAAAAGTACCTCAAAATGAATTGGTTTCTCCTCAATGCACGGAAGGAGAAAACACCCGAGACTCATCAGAGTTGGAATTTGAAGCTAGATCTTCGAAAGACCAGGCATGGTACGATGTTGAGACATTTCTCGCCCACAGATTTCTTAGCACAGGGGAACCTGAAGTCAGAGTCAGATTTGTTGGGTTTGGAGCTGAGGAAGATGAGTGGGTCAACATAAAAAATTCAGTCCGAGAACGCTCAGTTCCTTTCGAGAACACAGAGTGTTCCAACCTGAAAGTTGGAGACTATGTTTTGTGCTTCCAGGAGAGAAGAGATCAAGCAATTTACTATGATGCTCACATTGTAGAGATCCAAAGGAGAATGCATGATATCCGAGGTTGCAGGTGTCACATTTTAATTCGATATGATCACGACAACAATGAGGAAAGAGTTCGCTTGAGGAGACTTTGCCACAGACCAAGATCTTAG 699 0.4278 MDRLRPRNRPIFSGFTNSEIERMEKLLRESSKGQSFTLDFYQKLAKSFNLSSGRAGKPVIKWTEIHSWFQTRLQDSPKVPQNELVSPQCTEGENTRDSSELEFEARSSKDQAWYDVETFLAHRFLSTGEPEVRVRFVGFGAEEDEWVNIKNSVRERSVPFENTECSNLKVGDYVLCFQERRDQAIYYDAHIVEIQRRMHDIRGCRCHILIRYDHDNNEERVRLRRLCHRPRS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4106 232 Gene3D - 160 232 - -
Mtr3g4106 232 SUPERFAMILY Chromo domain-like 110 152 IPR016197 -
Mtr3g4106 232 Pfam SAWADEE domain 100 227 IPR032001 GO:0003682
Mtr3g4106 232 Gene3D - 98 159 - -
Mtr3g4106 232 MobiDBLite consensus disorder prediction 79 100 - -
Mtr3g4106 232 MobiDBLite consensus disorder prediction 79 94 - -
Mtr3g4106 232 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 231 IPR039276 -
Mtr3g4106 232 PANTHER OS09G0346900 PROTEIN 9 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4106 Mtr-Chr3 54828979 54836119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4106 - - gmx:100801021 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4106 3 54828979 54836119 Mtr3g4106 3 54828979 54836119 ECH