Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4102 ATGAAACTAGACACAGAAACAGATTGGTGTCTCCCTAACAATGTTACAGACATTACATGCATGGATAAACAACCAACGGTGGTAATTGAGAAAGTGAGCAAAACTGTGCGTTTACTAGGTTTTCTGATACAAAACGGTGTCTCTAAGAGTCATAGAGTTATGCAGGATATGCAAGAAGTGATGAAGAGAGGAAAAAACATAGGGAAAGCACTGAACAACGTGATGGTGAAGCACCATGAAGCACTCACGTGCCGTCCACGTGATGCTGATATGTATTTTATTTCACCGTTGGAGTATCAGTTCAGCTGTAGCAGCAGTCCACCGCGTCTCTCTCGTGGTGCAAACAGTAGTAGGAGGAAGCTATTATCTCCGGTGGCAGAACGCAGTCGCCGGCAAATGAGGGTGTATTATGGAACCAGAAATGAAGGGAGGCGCGTGAAGATGACGAAAAGGGAGACGGTTGAGGAGGTGTTTGAGGTGGATCAAGCGGCAGAGGAGTTCATAGAGAGGTTTTACAGAGAGTTGAGGTTGCAGAAATGGTTGGATCATCATTATCACTATTAA 564 0.4486 MKLDTETDWCLPNNVTDITCMDKQPTVVIEKVSKTVRLLGFLIQNGVSKSHRVMQDMQEVMKRGKNIGKALNNVMVKHHEALTCRPRDADMYFISPLEYQFSCSSSPPRLSRGANSSRRKLLSPVAERSRRQMRVYYGTRNEGRRVKMTKRETVEEVFEVDQAAEEFIERFYRELRLQKWLDHHYHY* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4102 187 Pfam Cotton fibre expressed protein 159 179 IPR008480 -
Mtr3g4102 187 PANTHER DUF761 DOMAIN PROTEIN 21 184 - -
Mtr3g4102 187 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 21 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4102 Mtr-Chr3 54806710 54807273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4102 - - mtr:MTR_3g109920 383.259