Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4089 ATGGCTGCTCAACTCTTTAGAGACCTATCTTTAGGCCATTCCAAAAGAAGAGATTCAACAACACCATCACCACCCTCGTTAAAGATAATGCCACCACCGCCAACCGCCGACGATCTTCCTTCCCCACTCGGTCAACTTTCCACCAACCTCTCCAATGAATACCTCACCTTAACCGCCTACGAGATCTTCGTCGCCGCATGTCGTACCTCTTCTGGCAAACCTCTCAGTTCATCAATTGCTAACTCCTCTTCCAACAACAACAATAGTCATTCTGACTCACCGAATCAGAACTCGCCGCTTGCTATTCAGAGATCTTTAACTTCCACGGCTGCTAGTAAGGTTAAGAAGGCTTTTGGTTTGAAATCTCCTGGTTCTGGTTCCAAGAAGAGTCCTGGTTCTGGTTCTGGTTCTGCCTCTGCTTCCGGTTCGGGTCAGGGGAAACTAAAACGACCGTTAACGGTTGGGGAGCTTATGAGGAATCAGATGAGGGTTTCTGAAGCTATGGATTCGCGTGTCAGACGTGCGTTGCTCAGAATTTCTGCTGGACAGGTTGGAAGAAGGATTGAGTCTGTGGTGGTTCCACTTGAGCTAATGCAGCAACTCAAGGCTTCGGATTTTACTGATCAACAAGAATACAATGAATGGCAGAAGAGAACTCTCAAGGTTCTGGAGGCTGGTCTAATTTTGCATCCTTACATACCTTTGGATAAATCCAACTCTGCTGCGCAGCGGCTGCGGCAGATTATTCATGCTGCTTTGGATAGGCCCATCGAAACCGGGAAGAATAATGAGTCCATGCAGGTTCTTCGTAGTTCTGTCATGTCTCTTGCAAATAGGTCGTATGATGGATCTCTCACTGATTCATGTCACTGGGCAGATGGGATTCCTCTGAATCTCCGGATTTATGAAATGCTTCTACAATCTTGCTTTGATGTTAATGATGAATCGTCAATTATTGAAGATTTTGATGAGCTAATGGAACAAATCAAGAAGACCTGGGGAATACTTGGATTGAACCAGACGTATCATAATCTCTGTTTTACTTGGGTTTTATTTCATCGATTTGTTGCCACTGGCCAGATGGATTTGGAGCTTCTGTCTGATGCTGATGGCCAGCTAGCTGAAGTTGCAAAAGATGCAAAGACAACCAAAGATTCCGAGTATTCCAAAATTTTGAGTTCTACATTGACTTCGATACTGGGATGGGCAGAGAAAAGGCTTCTTGCATACCATGAAACTTTTGATCGTGGAAATGTTGAAACTATGGAGGGCATTGTCTCTTTAGGGGTAGCAGCGGCTAAGATATTGCTTGAGGATATATCTAATGAATATCGTCGGAGGAGAAGAAATGAAGTCAATGTTGCCCGAGAAAGAATTGAAACGTACATCAGGTCATCTCTACGTACTGCTTTTGCCCAGATAATGGAGAAAGCAGACTCAAGCAGGAGGGCATCAAGAAACCAGCCAAATGCTCTCCCCCTCCTTGCCATTCTTGCAAAGGATGTAGGCAGCTTGGCAGTTAATGAAAAGCTAGTGTTCAGTCCAATACTCAAGAGATGGCATCCTTTAGCAGCTGGTCTTGCTGTGGCTACCCTCCATGCATGCTATGGAAACGAGTTGAAGCAATTCATTTCAGGTATCACAGAATTGACCCCTGATGCTGTTCAAGTGTTAAGAGCTGCAGACCAGTTGGAGAAAGACCTTGTGCAGATAGCTGTTGAGGATTCAGTGGACAGTGATGATGGTGGCAAAGCAATAATCCGCGAAATGCCTCCTTACGAAGCAGAAGGTGCAATTGCGAATCTCGTGAAAATATGGACCAAGACTAGAATAGACAGACTGAAAGACTGGGTTGATAGAAATCTGCAGCAAGAGCTTTGGAGTCCACAAGCAAATCAGGAAGGATACGCTCCATCTTCTGTTGAAGTTCTGCGAATCATAAATGAAACTCTGGATGCATTCTTTCAGCTTCCAATACCAATGCATCCTGCATTGCTTCCTGAAGTGATGCATGGCGTCGATAGATGCCTTCAATATTATGTGGCCAAAGCTAAATCTGGCTGTGGATCTCGAAATACATTTATTCCAACAATGCCGGCACTGACGAGATGCACTATTGGCTCAAAATTTCAAGGGTTTGGGAAGAAAAAAGATAAATCTCCAAATTCTCAGAAGAGAAACTCGCAGGTTGCAACAAATGGGGATAGCTCTTTTGGGATACCACAACTCTGTGTTCGCATAAATACTTTGCAGTGGATCCTGGGTGAATTTGATGTTCTGGAAAAAAGAATAATTACTCTTTTACGGAACTCAGAATCTGCCCGAGAAGAAGATTTTTCAAACGGATTAGCTAGTAAGTTTGAACTATCTCCAGCCGCGTGTCTTGAAGGAATTCAGCAGCTCTGCGAGGCTGTAGCATATAGAATTGTCTTCCATGATCTAAGCCATGTTTTATGGGATAGTTTGTATGTCGGAGATCCCTCATCTTCCAGGGTTGATCCGTTTCTTCAGGAACTTGAGCGAAACTTAATGTTCATTTCAGACAATGTTCATGAAAAAATTCGCACACGCATTATTACAGAAATAATGAGAGCTTCCTTTGATGGATTCTTGTTTGTATTGCTTGCTGGAGGCCCCTCTCGGGCTTTTTCCCGGAAAGATTCACAGATCATAGAGGATGATTTCAAAGTTCTAAAGGAGCTGTTTTGGGCAAATGGGGACGGCTTGCCTTCTGAAATAATAGACAGGTTTGCAACTACCCTGAGGTCTATCCTTCCCCTTTTCAGGACCGATACAGAGAGCCTCATTGAGCAGTTTAGACGGATAACAGTTGAGACATATAAATCTTCCGCCAGGTCTAGAATTCCATTACCTCCAACTTCCGGACAGTGGGGTCCATCTGATCCAAATACATTATTACGTGTTTTATGCTATAGAAATGATGAAGCAGCTTCAAAGTTTCTTAAAAAGACATATGATCTCCCTAAGAAACTTTAA 2997 0.4364 MAAQLFRDLSLGHSKRRDSTTPSPPSLKIMPPPPTADDLPSPLGQLSTNLSNEYLTLTAYEIFVAACRTSSGKPLSSSIANSSSNNNNSHSDSPNQNSPLAIQRSLTSTAASKVKKAFGLKSPGSGSKKSPGSGSGSASASGSGQGKLKRPLTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESVVVPLELMQQLKASDFTDQQEYNEWQKRTLKVLEAGLILHPYIPLDKSNSAAQRLRQIIHAALDRPIETGKNNESMQVLRSSVMSLANRSYDGSLTDSCHWADGIPLNLRIYEMLLQSCFDVNDESSIIEDFDELMEQIKKTWGILGLNQTYHNLCFTWVLFHRFVATGQMDLELLSDADGQLAEVAKDAKTTKDSEYSKILSSTLTSILGWAEKRLLAYHETFDRGNVETMEGIVSLGVAAAKILLEDISNEYRRRRRNEVNVARERIETYIRSSLRTAFAQIMEKADSSRRASRNQPNALPLLAILAKDVGSLAVNEKLVFSPILKRWHPLAAGLAVATLHACYGNELKQFISGITELTPDAVQVLRAADQLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIANLVKIWTKTRIDRLKDWVDRNLQQELWSPQANQEGYAPSSVEVLRIINETLDAFFQLPIPMHPALLPEVMHGVDRCLQYYVAKAKSGCGSRNTFIPTMPALTRCTIGSKFQGFGKKKDKSPNSQKRNSQVATNGDSSFGIPQLCVRINTLQWILGEFDVLEKRIITLLRNSESAREEDFSNGLASKFELSPAACLEGIQQLCEAVAYRIVFHDLSHVLWDSLYVGDPSSSRVDPFLQELERNLMFISDNVHEKIRTRIITEIMRASFDGFLFVLLAGGPSRAFSRKDSQIIEDDFKVLKELFWANGDGLPSEIIDRFATTLRSILPLFRTDTESLIEQFRRITVETYKSSARSRIPLPPTSGQWGPSDPNTLLRVLCYRNDEAASKFLKKTYDLPKKL* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4089 998 PANTHER ELONGATION FACTOR TS (DUF810) 3 998 - -
Mtr3g4089 998 Coils Coil 757 777 - -
Mtr3g4089 998 MobiDBLite consensus disorder prediction 25 39 - -
Mtr3g4089 998 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 829 939 IPR014772 -
Mtr3g4089 998 PANTHER PROTEIN UNC-13 HOMOLOG 3 998 IPR008528 -
Mtr3g4089 998 Coils Coil 836 856 - -
Mtr3g4089 998 MobiDBLite consensus disorder prediction 113 153 - -
Mtr3g4089 998 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 555 698 IPR014770 -
Mtr3g4089 998 MobiDBLite consensus disorder prediction 126 146 - -
Mtr3g4089 998 MobiDBLite consensus disorder prediction 1 44 - -
Mtr3g4089 998 MobiDBLite consensus disorder prediction 712 733 - -
Mtr3g4089 998 MobiDBLite consensus disorder prediction 74 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4089 Mtr-Chr3 54672964 54678386 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4089 - - gmx:100814675 1664.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4089 3 54672964 54678386 Mtr3g4089 3 54672964 54678386 ECH