Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4081 ATGTATAAGGCTATGGCCATTTCATACAATAATAATGCATTTATAGTAAATTGTGGTATTCAGAAAGGATCTCGTCACTATAACAATATTCCACTCTTCTCTATTTTCAAGTCAAACACGAGACCAACTCTACCCGAAGTCTCCTTGCAAATAGATATTCCCAAAACTATGAAAAATACTGTGGCTAAATTGATCGACGTTTTTGTGGATTCATTCTTTGAATTCATTGACAAGCCATTGCTTCCATCTAAGAGTAACTTTGCTCCTGTGGAAGAGTTGGAGGAAGCCATAGTTGTGACTTGCATCCATGGACGAATTCCGAATGATTTTCCAGAGGGTGTCTACATTAGAAATGGACCAAATCCACTTTTTGGAGGATTGAAATCAACAAATTCTATCTTTGGTAGGTCAAGTCATATTTGGGTGGAAGGAGAAGGAATGCTACATGCATTGTATTTTAAAAAATCAAATCATGGTAGCTGGACAGTCCTCTATAACAACAAGCACGTTGAAACCGAAACATACAAGCTTGAAAAACAAAGAAACAAACCGTTGTTTTTGCCAGCCATAGAAGGCAATTCACTTGCCATTTTGTCTGCTTATCTCTTCAACTGGTTGAGATCGGGCAAAGTAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCAGGAAAGTTTTACTCAGTTGCTGAAAGTCACATGCCACAAGAGATTGATATTTTTTCCTTGAAAACTTTAAACAATTGGGAACTCAGCGCAGCATGGAATCGACCTTTTACCAGCCATCCAAAGAAAGCTCCAATTACAGGGGAGCTAGTTACATTAGGTGTGGAACCAATTAAACCTTTTGCCGTGGTTGGAATTATTTCTGCCGATGGAAAGAAATTGGTTCATAAAGTTGATATCAAACTAAACAGGTGTAGTCTTTGCCATGACATAGGTGTTACACAAAGGTACAATGTGATCATGGATTTTCCACTAACCATTGATCTAAACAGACTTCTAAGAGGAGGCCAATTAATAAAGTATGATAGGAAAGAATATGCAAGGATTGGGGTAATGCCACGCTATGGCAATGCTAACTCAATCAAATGGTTTGAGGTGGAACCCAATTGCACATTTCACATTATCAATTCTTTTGAGGATGGAGATGAGGTTGTAGTGAGAGGCTGCAGATCTCTTGATTCTTTAATTCCTGAACCTGATCCGAGCTCGAAAGAATTTGAGTGGTTATCTCGTTGTCATGAATGGCGATTGAATATGCTAACCGGAGAGGTTAAGGAGAAAGATCTTTGTGGTAACAAACTTGTTTATATGGATTTTCCTATGATCAATGAAAACTTTGTTGGTGTTAAGCATAGATATGCATACACACAAGTAGTTGATCCTACAAGCTCTACCACTCAAGATGTGCCAAAATATAGAGGTATAGCTAAGCTATACTTAGAAGAAACATGTGCTGAATTCTCTATGTCAAAGAGAGAAAAAGAAGAACCTATAAGGATGGAATACCATATGTTTGAGAAGAATACATTTTGCAATGGGGCAGCGTTTGTGCCTAGAGATGGAGGTGTCGAAGAAGATGATGGTTTGATCATTACTTTTGTTCACAATGAAGATACTAACACATCTCAAGTTCATATAATCGATACAAAGAATTTTTCTGGCGAGACGGTTGCCAAAATTGAAATTCCTTTCAGAGTTCCATATGGGTTTCATGGAGCCTTCATGCCAATCTCATTCCAGGATTCTTATTAA 1761 0.3776 MYKAMAISYNNNAFIVNCGIQKGSRHYNNIPLFSIFKSNTRPTLPEVSLQIDIPKTMKNTVAKLIDVFVDSFFEFIDKPLLPSKSNFAPVEELEEAIVVTCIHGRIPNDFPEGVYIRNGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHALYFKKSNHGSWTVLYNNKHVETETYKLEKQRNKPLFLPAIEGNSLAILSAYLFNWLRSGKVNKYISNTNVFEHSGKFYSVAESHMPQEIDIFSLKTLNNWELSAAWNRPFTSHPKKAPITGELVTLGVEPIKPFAVVGIISADGKKLVHKVDIKLNRCSLCHDIGVTQRYNVIMDFPLTIDLNRLLRGGQLIKYDRKEYARIGVMPRYGNANSIKWFEVEPNCTFHIINSFEDGDEVVVRGCRSLDSLIPEPDPSSKEFEWLSRCHEWRLNMLTGEVKEKDLCGNKLVYMDFPMINENFVGVKHRYAYTQVVDPTSSTTQDVPKYRGIAKLYLEETCAEFSMSKREKEEPIRMEYHMFEKNTFCNGAAFVPRDGGVEEDDGLIITFVHNEDTNTSQVHIIDTKNFSGETVAKIEIPFRVPYGFHGAFMPISFQDSY* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4081 586 Pfam Retinal pigment epithelial membrane protein 88 579 IPR004294 GO:0016702
Mtr3g4081 586 PANTHER OS06G0162550 PROTEIN 42 580 - -
Mtr3g4081 586 PANTHER BETA-CAROTENE DIOXYGENASE 42 580 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4081 Mtr-Chr3 54578147 54582959 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4081 - - gmx:100817738 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4081 3 54578147 54582959 Mtr3g4081 3 54578147 54582959 ECH