Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4078 ATGAACTCAGTCTCTAAATGCTCAGTTCATCAACTGGAGAACATAGATGAGAATGTTCCTGTAGATAGGCCTGCATCATCTTGCGCCGCACCTGATACCCCAACTGAATCTATGGAGTTCCTTGCTAGATCATGGAGTCTTTCTGCTACGGAACTCTCCAAAGCACTGCACAGCACCAATTCTACAACCTCCACCGGCATTGATGTTCAACTTTTATGCCCTTCTGACCAGTTTTATACCAAGGGTTTTACTGCCTCAAAAGAAGATCCTCAGCTATCTAACGGACATTGTTGTCAGATTTTGCCAAGAGAAAGTAGCGAAACAAAGGAATTATTTTTACTTCACCAAGCACTTTCTCCAGAATTCCTTTCCAATCAAAACTTGCTGAGAAATGGGCTTTACAGGAGCTTGATAAGAGGGAGGACTACGGGGAGGTGGTTGAAAGATCAGAAGGAGAGGAAAAAACAGGAAATCAGGACTCATAACGCTCAGTTGCACGCCGCAGTATCTGTAGTTGGTGTTGCTGCCGCTGTTGCAGCAGTCACAGCTTCAATAGCATCATCCGAAAAGCCTAATCCCAACCAAAAGAACCCTACCATGGCTTCTGCTGCAATTGCATCTGCAGCAGCTCTAGTAGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGAGCTGAACAGGACCAAATCATAACTGCAGTTGACTCTGCTATTAATGCAAAAACCAATGGAGATATTATGACTCTAACAGCCGGAGCAGCCACAGCATTGCGAGGAGCTGCTACTTTGAAGGCACGTCTGGAGAAAGGGCTTGGAGCTACTACGATTCCAACTGTTGACGAGAAGATTGGTGTAGCCAAAGAAGCAAACATCTTGACAGCACTGGACTGTGTCTTTAGAGGAGGAGTACTTCTCAAACGTACAAGAAAAGGAGTTCTTCACTGGAAGCAAGTCTCTTTCAATATTAATTCAAATTTGCAGGTAGTAGCCAAAATGAAAAGCAAGCATATTGCAGGAACATTCACAAAAAAGAAGATATATATAGTCACCGGAGTGTGCAGTGATATCCCAGCTTGGCCCGGAAGGGAAAAGGAAGACAACGGAAAAAAGAGAGCATATTTTGGAATAAGAACAGCGGATAGATCAATAGAATTTGAATGCGGAAGTAATGAAGACAAACAGTTCTGGTTAGAGGGAATCCATTACATGTTGAACTGCGGCGCCAAAGTAACATCCTAA 1239 0.4374 MNSVSKCSVHQLENIDENVPVDRPASSCAAPDTPTESMEFLARSWSLSATELSKALHSTNSTTSTGIDVQLLCPSDQFYTKGFTASKEDPQLSNGHCCQILPRESSETKELFLLHQALSPEFLSNQNLLRNGLYRSLIRGRTTGRWLKDQKERKKQEIRTHNAQLHAAVSVVGVAAAVAAVTASIASSEKPNPNQKNPTMASAAIASAAALVASHCIEIAEDMGAEQDQIITAVDSAINAKTNGDIMTLTAGAATALRGAATLKARLEKGLGATTIPTVDEKIGVAKEANILTALDCVFRGGVLLKRTRKGVLHWKQVSFNINSNLQVVAKMKSKHIAGTFTKKKIYIVTGVCSDIPAWPGREKEDNGKKRAYFGIRTADRSIEFECGSNEDKQFWLEGIHYMLNCGAKVTS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4078 412 Pfam Plant pleckstrin homology-like region 304 406 IPR013666 -
Mtr3g4078 412 Gene3D - 279 409 IPR011993 -
Mtr3g4078 412 SUPERFAMILY PH domain-like 299 404 - -
Mtr3g4078 412 PANTHER EXPRESSED PROTEIN 7 409 IPR040269 -
Mtr3g4078 412 ProSiteProfiles PH domain profile. 297 405 IPR001849 -
Mtr3g4078 412 Pfam Auxin canalisation 31 275 IPR008546 -
Mtr3g4078 412 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 7 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4078 Mtr-Chr3 54561949 54565088 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4078 - - mtr:MTR_3g110182 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4078 3 54561949 54565088 Mtr3g4078 3 54561949 54565088 ECH