Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4063 ATGGTGAATCCTTTGGTTGAACGTGCCACCAGCGACTTCCTCATTGGTCCTGATTGGGCTTTGAATCTCGAGATCTGTGATGTACTCAATCGTGATCCCGGGCAAGCAAAGCATATTGTTAGAGGTTTAAAGAAGCGGATTGGACACAGAAATTCTAAAATTCAAATTCTTGCGCTAACTCTGCTGGAGACAGTCATAAAGAATTGCGGGGACATTGTCCACATGCATGTTGCCGAGAGAGAGGTTCTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCCGATTATCATGTCCGAGAGAAGATACTGGCTCTTATTGATACTTGGCAAGAAGCTTTTGGAGGTCCAAGGGCAAAATATCCACAGTATTATGCTGCCTACCAGGAACTGCTGCATGCGGGGGCTCCGTTCCCTTCAAGATCTGAGCAATCTGCACCTGTATTCACACCAGTACAAACACAACCATTGGGATCATACCCTCAAAATATACGTGATTCTGATTCTCAGCAACCGGAAGCTGAGTCCTCAGTGGAGGCTGAGTTTCCAACCCTTAGTTTGACCGAAATTCAGAATGCACGTGGTATTATGGACGTTCTTGCAGAAATGCTCACTGCTTTAGAGCCTAGTAGTAACAAAGAAGGCCTCCGGCAGGAAGTTATTGTTGATTTGGTGGAGCAATGTCGCACATACAAGCAAAGAGTGGTACACCTTGTTAATTCAACTTCGGATGAGTCACTTCTATGCCAAGGACTAGCTCTTAATGATGATCTGCAGCGTGTACTTTCCAAGCATGAATCCATTTCTTCGGGAGCTGCTGTTCAAAATCACAAGCATGAATCCATTTCTTCAGGAGCTGCTGTTCAAAATCACACTGAGAAACCAAATCCTGAACCTAGTGGAGCACTTATAGATGTTGATGGTCCTTTGATTGATACTGGAGATACTAGTAAACAAACTGATGCGAGATCATCTTCTAGTGCTGAAGCAGGGTCTCAAACATTTAATCAATTGTTGCTTCCTGCACCCTCTACATCAAATGGTTCGGCTCCTCCAGTAAAAGTTGATCCCAAATGGGATCTGCTCAGTGGTGAAGAGTATAACTCACCAAAAGCAGATAATTCACTTGCTCTTGTTCCTGTAGAACAACAGCCTGCCAGTCCTGTGTCTCAACAGAATGCCCTTGTTCCTTTTGATTTGTTTTCTAATGGAAACATTGTACCCACTTCTGTTAATACCCAGCTAATAGCCCCCCAATTTCAACAACAAACTATCATATCTCAAGGTGTATTTTACCCGAATGGAAGTATGCCTAATGTGGGATCACCTCGGTACGAGCAATCAATATATACTCAAAACACAGGTCCTGCCTGGAATGGTCAGGTTGTGCAGCAGCAACAGCAACAGCCACCTTCACCCGTTTATGGTGCACAAAGTGGTGGATCATTTCCCCCTCCTCCTTGGGAAATTCAACCTGCAGACAATGGTAGTCCAGTAGCCGGCAGTCAATACCCGCAGCCACTGCAAGTCACGGTACATGTACAAACTGCTGCCCTTCCTCAGGGACCTCAAGCAACCGGGTATGACCAGGCTGCTGGAATGTATATGCAGCCAAATGCTAGCCATTTCTCTTCAATCAATAACCAGGTTCAAAGTAACCAATTTGGTTTGCAGCCTCCGTATATTCAGGGTGTTGCAGGTCCTTATATGGGCATGGTTCCGCATCAAATGCAAAATGGTCCCGTGGCTTCCATGTATCCTCAACAGATGTATGGTAACCAATTTATGGGATATGGCTATGGTCAGCAACAGCAACAAGGGCCTCAATATATCGAGCAGCAAATGTATGGTTTATCTGTGAGAGATGATAATGCTTCAAGAAATCCTTACCAGGTTTCTGCTGCATCTTATGCGCCATCCGGAAAGCCTTCCAAGCCTGAGGATAAGTTATTTGGAGATCTTATTGACTTTTCAAAAGTGAAACCAAAATCCACTCCAGGCCCCAGCTGA 2007 0.4474 MVNPLVERATSDFLIGPDWALNLEICDVLNRDPGQAKHIVRGLKKRIGHRNSKIQILALTLLETVIKNCGDIVHMHVAEREVLHEMVKIVKKKPDYHVREKILALIDTWQEAFGGPRAKYPQYYAAYQELLHAGAPFPSRSEQSAPVFTPVQTQPLGSYPQNIRDSDSQQPEAESSVEAEFPTLSLTEIQNARGIMDVLAEMLTALEPSSNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLSKHESISSGAAVQNHKHESISSGAAVQNHTEKPNPEPSGALIDVDGPLIDTGDTSKQTDARSSSSAEAGSQTFNQLLLPAPSTSNGSAPPVKVDPKWDLLSGEEYNSPKADNSLALVPVEQQPASPVSQQNALVPFDLFSNGNIVPTSVNTQLIAPQFQQQTIISQGVFYPNGSMPNVGSPRYEQSIYTQNTGPAWNGQVVQQQQQQPPSPVYGAQSGGSFPPPPWEIQPADNGSPVAGSQYPQPLQVTVHVQTAALPQGPQATGYDQAAGMYMQPNASHFSSINNQVQSNQFGLQPPYIQGVAGPYMGMVPHQMQNGPVASMYPQQMYGNQFMGYGYGQQQQQGPQYIEQQMYGLSVRDDNASRNPYQVSAASYAPSGKPSKPEDKLFGDLIDFSKVKPKSTPGPS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4063 668 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Mtr3g4063 668 PANTHER TOM1-LIKE PROTEIN 1 665 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mtr3g4063 668 Pfam GAT domain 194 269 IPR004152 GO:0035091|GO:0043130
Mtr3g4063 668 ProSiteProfiles GAT domain profile. 180 269 IPR004152 GO:0035091|GO:0043130
Mtr3g4063 668 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Mtr3g4063 668 MobiDBLite consensus disorder prediction 459 503 - -
Mtr3g4063 668 MobiDBLite consensus disorder prediction 622 637 - -
Mtr3g4063 668 Gene3D - 1 148 IPR008942 -
Mtr3g4063 668 Pfam VHS domain 4 129 IPR002014 GO:0035091|GO:0043130
Mtr3g4063 668 MobiDBLite consensus disorder prediction 268 295 - -
Mtr3g4063 668 MobiDBLite consensus disorder prediction 312 331 - -
Mtr3g4063 668 CDD VHS 2 130 - -
Mtr3g4063 668 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Mtr3g4063 668 MobiDBLite consensus disorder prediction 156 178 - -
Mtr3g4063 668 PANTHER TARGET OF MYB PROTEIN 1 1 665 - -
Mtr3g4063 668 SUPERFAMILY GAT-like domain 142 270 - -
Mtr3g4063 668 MobiDBLite consensus disorder prediction 622 668 - -
Mtr3g4063 668 CDD GAT_GGA_like_plant 188 267 - -
Mtr3g4063 668 MobiDBLite consensus disorder prediction 268 331 - -
Mtr3g4063 668 Gene3D - 183 276 IPR038425 -
Mtr3g4063 668 MobiDBLite consensus disorder prediction 459 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4063 Mtr-Chr3 54400407 54407946 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4063 - - gmx:100805762 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4063 3 54400407 54407946 Mtr3g4063 3 54400407 54407946 ECH