Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4059 ATGCGCCCACCGATTATTCTCGAATCAACCACCACTTTTTCTTCTTCTTATTCTTCTTCATCTGATCGCAGGCTAGACACTATTGCAAAACACTTTCTCGACGTTAACGATCAAAATCAAATGGCTTCTCAAAACATCACTCCTTCTCCAACCGCTTCTTCTGATTCCGTCTTCGCTCATCTCGTTCGTGCTCCTGAAGATCCTATCCTCGGTGTAACTGTCGCTTACAACAAGGATCCAAGCCCAATTAAGCTCAACTTGGGTGTTGGTGCTTACCGAACTGAGGAAGGTAAGCCCCTTGTGTTGGATGTTGTGAGGCGAGTTGAACGCCAACTATTGAATGACATGTCACGCAACAAGGAGTATATTCCAATTGTTGGGCTCGCTGATTTCAACAAATTGAGTGCTAAGCTTATTTTTGGTGCAGACAGCCCTGCTATTCAAGAGAACAGGGTTACCACTGTTCAAGGTTTATCTGGTACTGGTTCGCTAAGAGTTGGGGGTGAATTTCTGGCTAAACACTATCATCAACGCATTATATACTTGCCAACACCTACTTGGGGCAATCATACAAAGGTTTTCAACTTGGCAGGTTTAACTGTCAAAACATATCGCTACTATGCTCCAGCAACACGAGGGCTTGACTTTCAAGGACTTCTTGAGGATCTTGGTTCTGCCCCATCTGGATCTGTTGTTTTGCTACATGCATGTGCACATAACCCTACTGGTGTTGATCCAACGCTTGAACAATGGGAGCAGATTAGACATCTGATAAGATCAAAATCTTTGTTACCTTTCTTTGACAGTGCTTATCAGGGTTTTGCCAGTGGAAGTCTAGATGCAGATGCACAGCCTGTTCGTTTGTTTGTTGCTGATGGTGGAGAATTGCTGGTAGCCCAGAGTTATGCGAAGAACATGGGTCTTTATGGTGAACGTGTTGGTGCCTTGAGCATTGTCAGCAAGTCAGCTGATGTTTCAAGCAGGGTTGAGAGCCAACTGAAACTTGTGATTAGGCCCATGTACTCAAGTCCTCCTATTCATGGTGCATCCATTGTGGCTGCCATTCTCAAGGACAGGGATTTGTACAATGACTGGACTATTGAGTTGAAGGCAATGGCTGATCGCATTATCAATATGCGCCAACAACTTTTTGATGCTTTACGTGCTAGAGGTACACCAGGTGATTGGAGTCACATTATCAAGCAAATTGGAATGTTTACTTTCACAGGATTGAATCCTGAGCAAGTTTCCATCTTGACTAAAGAGTACCATATATACCTGACATCTGATGGGAGGATTAGCATGGCTGGTTTGAGCTCCAAAACAGTCCCACATCTGGCCGATGCAATACATGCAGTTGTAACGCGAGTTGCTTAA 1377 0.4423 MRPPIILESTTTFSSSYSSSSDRRLDTIAKHFLDVNDQNQMASQNITPSPTASSDSVFAHLVRAPEDPILGVTVAYNKDPSPIKLNLGVGAYRTEEGKPLVLDVVRRVERQLLNDMSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHQRIIYLPTPTWGNHTKVFNLAGLTVKTYRYYAPATRGLDFQGLLEDLGSAPSGSVVLLHACAHNPTGVDPTLEQWEQIRHLIRSKSLLPFFDSAYQGFASGSLDADAQPVRLFVADGGELLVAQSYAKNMGLYGERVGALSIVSKSADVSSRVESQLKLVIRPMYSSPPIHGASIVAAILKDRDLYNDWTIELKAMADRIINMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNPEQVSILTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAVVTRVA* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4059 458 CDD AAT_like 85 438 - -
Mtr3g4059 458 PANTHER ASPARTATE AMINOTRANSFERASE 55 458 - -
Mtr3g4059 458 SUPERFAMILY PLP-dependent transferases 56 456 IPR015424 -
Mtr3g4059 458 Gene3D Aspartate Aminotransferase, domain 1 63 450 IPR015422 GO:0003824
Mtr3g4059 458 Gene3D - 117 358 IPR015421 GO:0003824
Mtr3g4059 458 PRINTS Aspartate aminotransferase signature 232 251 IPR000796 GO:0006520|GO:0008483
Mtr3g4059 458 PRINTS Aspartate aminotransferase signature 263 275 IPR000796 GO:0006520|GO:0008483
Mtr3g4059 458 PRINTS Aspartate aminotransferase signature 331 356 IPR000796 GO:0006520|GO:0008483
Mtr3g4059 458 PRINTS Aspartate aminotransferase signature 399 417 IPR000796 GO:0006520|GO:0008483
Mtr3g4059 458 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 301 314 IPR004838 GO:0003824|GO:0009058|GO:0030170
Mtr3g4059 458 PANTHER ASPARTATE AMINOTRANSFERASE 55 458 IPR000796 GO:0006520|GO:0008483
Mtr3g4059 458 Pfam Aminotransferase class I and II 83 450 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4059 Mtr-Chr3 54349176 54353782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4059 K14454 - gmx:547509 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4059 3 54349176 54353782 Mtr3g4059 3 54349176 54353782 ECH