Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4047 ATGGTTGTCCTTCATCTCCCGAGGTTATCCTTTTCCCTTTTCACAGTCTCATCTTCTTCATTTTCTCGCAGAGTCTATTCAACAAACACCTTAACCACACTCTTAAACAAACCACCAAAATCATCTCTCACAACTTCAGAACCAAATCTAGAACCCATAATAACCCCTAAAACCGAACCCTTATCACTCGAAAAACTCTTCATTCCTCCAAACACTCATGTCACTCACGAAAATGCAAGAATCTTAAACGGTTCAAATATATTACTCAGTAACTACGCCAATGATGCTCAAATTATACAAGCAGATTTTGTCAAAAGCAGTGTTAGAACCGAAGATTGTCCTTCCGATGGTCTTCCTGAGTTCGCTCTTGTTGGTCGTTCCAATGTTGGGAAATCATCGCTTCTTAATTCTATTGTTCGCCGCAAGAAACTCGCTTTAACTTCAAAGAAACCTGGGAAGACGCAATTGATTAATCATTTTCGAGTTAATGATAGTTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCGCCGCAGGAACTTAGAATGGATTGGGCGAAATTCACCAAAGACTATTTCCTTAACCGGTCAACATTGGTTTCGGTTTTCCTTCTAATAGATGCTAGCATTCCTGCTAGAAAGATTGATCTTGAGTATGCTGCTTGGTTGGGTGAGAATAAGATCCCAATGACATTAATCTTCACCAAATGTGACAAACGGAAGAAGAAAAAGAATGGAGGCAAAAGACCTGAAGATAATGTCAATGATTTTCAGGAGTTGATACGTGGCTCCTTTGAAACTGTGCCTCCATGGATCATGACTAGTAATGTCACCCATCAAGGTCGTGATGAGATACTACTCCATATGGCCCAGCTTCGTAACTACTGGCTCAAGCACTAG 906 0.4084 MVVLHLPRLSFSLFTVSSSSFSRRVYSTNTLTTLLNKPPKSSLTTSEPNLEPIITPKTEPLSLEKLFIPPNTHVTHENARILNGSNILLSNYANDAQIIQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQLINHFRVNDSWYLVDLPGYGYASAPQELRMDWAKFTKDYFLNRSTLVSVFLLIDASIPARKIDLEYAAWLGENKIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQELIRGSFETVPPWIMTSNVTHQGRDEILLHMAQLRNYWLKH* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4047 301 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 117 297 IPR030393 GO:0005525
Mtr3g4047 301 Pfam 50S ribosome-binding GTPase 121 238 IPR006073 GO:0005525
Mtr3g4047 301 Gene3D - 93 297 IPR027417 -
Mtr3g4047 301 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 55 298 - -
Mtr3g4047 301 CDD YihA_EngB 120 294 IPR030393 GO:0005525
Mtr3g4047 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 297 IPR027417 -
Mtr3g4047 301 Hamap Probable GTP-binding protein EngB [engB]. 106 295 IPR019987 GO:0005525
Mtr3g4047 301 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 55 298 - -
Mtr3g4047 301 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 101 289 IPR019987 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4047 Mtr-Chr3 54160730 54163943 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4047 K03978 - gmx:100784426 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4047 3 54160730 54163943 Mtr3g4047 3 54160730 54163943 ECH