Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4045 ATGGACTACCCTCTTCTACCCGTTTTTACGATACTCAATCTTGTATTGGTTGCAACTCATGCTGCTTTACCTCCTGAACTTTACTGGAAGTCAGTGCTTCCTACCACGCCAATGCCAAAAGCCATAACTGATATCCTCCACCCTGGTTGGATGGAAGACAAAAGCACAAATGTGGGTGTAGGGAAAGGAGTTTCTGTAAATGCAGGCCATAAGAGAAAGGGGAAGCCTGCAACTGTTGTAGTTGGTCCACACTCACCTTTTGCTTACAACTATGCTGCCACTGAGACTCAATTACATGATGACCCTAGAGCAGCATTATTCTTCTTGGAAAAAGACTTGCACCCTGGAACAAAAATGGACTTAAACTTCATTAGAAGTTCAAATGTAGCCACATTCTTGCCTCGACAAGTTGCGTCTGCAACACCGTTTTCATCCGAAAAGTTGAGTCATATCTTTAATAAGTTTTCTGTCAAACCTGAGTCAGAGGAGGCTCATGTCATGAAGAATACTATTGAGGAGTGTGAAGACGCAGCCATTCAAGGCGAAGAAAAATATTGTGCAACCTCGCTTGAATCCATGGTTGATTTTAGCATTTCGAAGCTTGGGAAAAGAGTTAAGGTTGTGTCTACTACGGTGGTAGACAACAAGAGTGCAGGGTTAAAGAAATACACACTAAAATCAGGATTAATGAAGCTAACTGCAGAGGATAAGGCTGTTGTGTGTCACAAACAAAATTATCCATATGCTATATTTTATTGTCACAAAACAGAGAGCACAAGAGCTTATTTTGTTCCTTTGGAGGCCGATAACGGGACTAGAGTTAAAGCCGACGCTGTAGTGATATGCCACACAGATACATCAAAATGGAACCCCGAACACATTGCCTTTCAAGTGCTCAAAATTAAGCCAGGAACCCTTTCGGTCTGCCACTTTCTTCCTGTGGATCACATTGTTTGGGTTCCAGAGTAA 969 0.4231 MDYPLLPVFTILNLVLVATHAALPPELYWKSVLPTTPMPKAITDILHPGWMEDKSTNVGVGKGVSVNAGHKRKGKPATVVVGPHSPFAYNYAATETQLHDDPRAALFFLEKDLHPGTKMDLNFIRSSNVATFLPRQVASATPFSSEKLSHIFNKFSVKPESEEAHVMKNTIEECEDAAIQGEEKYCATSLESMVDFSISKLGKRVKVVSTTVVDNKSAGLKKYTLKSGLMKLTAEDKAVVCHKQNYPYAIFYCHKTESTRAYFVPLEADNGTRVKADAVVICHTDTSKWNPEHIAFQVLKIKPGTLSVCHFLPVDHIVWVPE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4045 322 Pfam BURP domain 106 321 IPR004873 -
Mtr3g4045 322 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 7 52 IPR044816 -
Mtr3g4045 322 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 56 321 IPR044816 -
Mtr3g4045 322 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 7 52 - -
Mtr3g4045 322 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 56 321 - -
Mtr3g4045 322 SMART BURP_2 105 322 IPR004873 -
Mtr3g4045 322 ProSiteProfiles BURP domain profile. 107 322 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4045 Mtr-Chr3 54116992 54119998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4045 - - gmx:100301893 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4045 3 54116992 54119998 Mtr3g4045 3 54116992 54119998 ECH