Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4044 ATGGTAGAAGATGCAAATGACAAGGATCCTGAATTCAAATGGGGAAAACATAAATGCTTCGGTGGCAAAAAAAGGGAAGTTAATTTCTACGAATCGTTTACTTACGATGGTGTTCATTACACTCTTTACGATTCTGTTTATCTTTACAAAGAAGGTGAACGTGAACCGTTTATTGGCAAAGTAATCAAAATTTGGGAAAATGCTAATAAGAGTAAGAAAGTTAAGATTCTATGGTTTTTTCGTCCATGTGAGATTTTTAATTTCTTGCAAGGGTACGAGCCTGTTGAAAATGAGTTGTTTTTGGCTTCTGGTGAAGGATTAGGGCTTACAAATATCAATCCTCTGGAAGCTATTGCTGGAAAATGCAATGTTGTTTGCATTTCAAAGGACAACAGAAATCCACCTCCACCAGACAAAGATCTTCAAAATGCCGATTTTGTATGCTATCGTTTCTTTGATGTTGGGCAGCATAAAATATTGGACAAGGTAGATGATAAGATTGCTGGAATTGAAGTTAAAAATATTTTTAACAATTTATATAGTCAAAAGCTTGGCGGTTTTTCGAAACTTGGTTTAGATGAGAAACAAGTTGGCGTGAAAGTCACGGAAAGTAATGAAGCGGTGGCTCTTTCAAGTAAAAAAAACAATAAGCATTTGATTGAAAAACTAGATGGCAAGTGTTTTGATAATGTTGATTTTAAGCCATCATTGGGAGAAAAACGTACCTCTAGCCTTGGTTTAAAGGACACTAGTAAATCGAATGGTGGTTTGCACTCTATTTCCCGTGACAAGACCTTGCCTCAAGCCAAAGAGAAAGAGAATGGGGTTAACAAGGCTTCTTTGGTTAAACAAAAATCATCTTCCAAACTATCACATTGCTCTAGCGATGGTTTGGAAATCGTAGGAATGTCTAAAATTGGAGGAAATGTCTCCATTGATAAGACCGTTTTGAAGTCCAAGTTTGATTCAGAAATGGGCGGACGTAATGTTGTTGGGGTCTCCGATCGACACATCAACAAGCGATTGGGGGAGGGCAACACCTCTGAGAAGGATAAGTACAATTTTTCTAGTGCAAAGACGACAAATAATGTTAAAAATCGAAGGGATGTCGATGTGAAGGAAGTCCCTTCAAAAAAGCTAAAGATTGACACAACGTCAGTTAAACTCTCTAGTGACAAGTTGGCCGACATGCAAATTAACAAGCGATTGGAGGAGAGAAAGGCTTCTTTTAAAGAAAAATATGGCGTTTCTAGTAGGACAAATCATGTGCAAAATCAAAGGAACCATGATGATGATGTGAAGGAAGCCCCTTCGAAAAAGCTAAAGATTGACACAATGCATACTAAACTCTCTAGTGGCAAGTTGCGTAAAGAATCGTCTACAACCTCTCCAAACTTGGAGCACAAGCAAGATTACAGTGTAACGGATGTTACTCAAAGACCTGACGTTGATAGAAGCAAATGGTTTAAGCCAATGCCTTGGGAGGAAAGAATGAAAGATGCTTATGAGCAAGGGAGACTTGTGCTGCTTGAAAATTTGGATCCTTCTTTAACTTCATCAGAAGTGCAGGATATTATTTTGGATGGCTTTAAAGAACGATGTACTGCAAAGCTGATCCAGAAGACCGCATATTCTAGTCCTAATTCTGGTCAAGCTTTTGCTATATTTAAAAGAAAGGAAGCAGCAGAATCTGTCATTAGAAATTTGGAGGAGGGGTGTTTCTTGATGTCAAATGGGCGCCCACTTGTGGGAAGCTTTGGAAGACTCCCTTGCATTCCGGAGAAGAAGCCGACATTTTATGGTCATCATGTTATTGACCAACTTCGATTGCAAACACAACGTGAGATGAAAGATGCAATATCTACTTCACATTGTTCTCAGCCCAACAACATTGAATATGATATGGCTGTAGAGTGGTGTTTACTACAAGAAAGAGCGGACAAATCTTGGAGAAAATTATATCAGCGACAAGGTGGGGAGTTGAGCAAACTCAAAGCTAAGTTGAAGTCTAAACTCTAA 2019 0.3863 MVEDANDKDPEFKWGKHKCFGGKKREVNFYESFTYDGVHYTLYDSVYLYKEGEREPFIGKVIKIWENANKSKKVKILWFFRPCEIFNFLQGYEPVENELFLASGEGLGLTNINPLEAIAGKCNVVCISKDNRNPPPPDKDLQNADFVCYRFFDVGQHKILDKVDDKIAGIEVKNIFNNLYSQKLGGFSKLGLDEKQVGVKVTESNEAVALSSKKNNKHLIEKLDGKCFDNVDFKPSLGEKRTSSLGLKDTSKSNGGLHSISRDKTLPQAKEKENGVNKASLVKQKSSSKLSHCSSDGLEIVGMSKIGGNVSIDKTVLKSKFDSEMGGRNVVGVSDRHINKRLGEGNTSEKDKYNFSSAKTTNNVKNRRDVDVKEVPSKKLKIDTTSVKLSSDKLADMQINKRLEERKASFKEKYGVSSRTNHVQNQRNHDDDVKEAPSKKLKIDTMHTKLSSGKLRKESSTTSPNLEHKQDYSVTDVTQRPDVDRSKWFKPMPWEERMKDAYEQGRLVLLENLDPSLTSSEVQDIILDGFKERCTAKLIQKTAYSSPNSGQAFAIFKRKEAAESVIRNLEEGCFLMSNGRPLVGSFGRLPCIPEKKPTFYGHHVIDQLRLQTQREMKDAISTSHCSQPNNIEYDMAVEWCLLQERADKSWRKLYQRQGGELSKLKAKLKSKL* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4044 672 CDD RRM_SF 508 582 - -
Mtr3g4044 672 MobiDBLite consensus disorder prediction 336 371 - -
Mtr3g4044 672 MobiDBLite consensus disorder prediction 240 290 - -
Mtr3g4044 672 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 506 589 IPR000504 GO:0003723
Mtr3g4044 672 SMART BAH_4 38 164 IPR001025 GO:0003682
Mtr3g4044 672 Gene3D - 7 162 IPR043151 -
Mtr3g4044 672 PANTHER PROTEIN ANTI-SILENCING 1 1 670 - -
Mtr3g4044 672 MobiDBLite consensus disorder prediction 455 472 - -
Mtr3g4044 672 MobiDBLite consensus disorder prediction 410 478 - -
Mtr3g4044 672 MobiDBLite consensus disorder prediction 424 454 - -
Mtr3g4044 672 ProSiteProfiles BAH domain profile. 38 163 IPR001025 GO:0003682
Mtr3g4044 672 MobiDBLite consensus disorder prediction 349 363 - -
Mtr3g4044 672 MobiDBLite consensus disorder prediction 243 261 - -
Mtr3g4044 672 Pfam BAH domain 39 159 IPR001025 GO:0003682
Mtr3g4044 672 PANTHER PROTEIN ANTI-SILENCING 1 1 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4044 Mtr-Chr3 54100175 54114066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4044 - - cam:101508998 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4044 3 54100175 54114066 Mtr3g4044 3 54100175 54114066 ECH