Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4043 ATGGGTTGCGCTCAATCACGCATAGACAATGAAGAATCAGTATCACGTTGCAAAGACCGTAAAAACTTAATGCGTGAAGCTGTCGCCGCTCGTAACGCTTTCGCCGCCGGTCATTCCGGTTACGCCATGGCTCTCAAAAACACCGGCGCCGCTCTATCCGACTATGCTCACGGCGAAACTCATCTTGACGACATTGAGCTTCATCCACCGCCTCTTCATTCTGATCCGCCTCCTCCACCGCCTTTGGAAGAATCCCTCCCTCCTCCACCACCTCTTCCACCTAATTTCTCACCGGCTTCTCTCAAACGCTCTGTAACATTGCCGCCTGTGTCGTTGCAGTTACAGCACCGCAAGATCGGCGGTGGAATTAGTGGTGGAGGTGACATTGTTGAAGAGGTGGAGAAAGGGAAAGGCGGTGATGGTGATGGACTGGTTCACGCGCCTCACGCGCCTCACGCGCCACCTTCTCCTTCTTCTGGGAGTAAAGTGATGCCGCCACCGCCTTTGCCGGATTCGAAGAACATGGCTTGGGATTATTTCTTTATGGATATGGATAATATGGGAAGAGGTTCTTTGAATGAGGAAGATGAGATTGAGAATGAAGAAGGCGAAATTGAAGGTGAGAATGTTGATGTTAATGGAGGACATGTGGAGGATGAGATTGAACCCAAGACACCGGAGAAAGTTGAGGTTGATGTGTATAATAAGGAGCATGGACATGAACATGAACATGAGGATGATGTGATAAGAGAGGCTACACATATTGAACATTCTAAAACTGCTCCTGCTGAGTTTAGAAGAGCAATTAAGGTGGTTCCTTCTGTTACCCTTATGCAGATTCTTAGTTCTCTTGATGATCATTTTCTTAAAGCTTCTGAGACTGCTCAAGATGTTTCTAAGATGCTTGAAGCTACTAGGTTGCATTATCATTCTAATTTCGCCGATGGTCGGGGTCACATTGATCATTCTGCTAGAGTCATGCAAGTGATAACATGGAATAGGTCATTCAAGGGTGTATCCAATGGGGAGGGTGCAAAAGATGATTTTGATTCTGAAGATAAAGAAACACATGCCACTGTTTTGGACAAGTTGTTAGCATGGGAAAAGAAACTCTATGAAGAAGTCAAGCAAGGTGAGCTTATGAAGTTTGAATATCAAAGAAAAGTTGCAATTCTGAACAAGCAGAAGAAGCGTGGTGCCAGTGTTGAATCATTAGGAAAAACTAAAGCGGCCGTAAGTCATTTACACACAAGATATATTGTTGATATGCAGTCGATGGACTCAACAGTTTCTGAAGTGGACCATATTCGCGATTCTCAGTTGTATCCAAAACTTGTTGCTCTTGTTATTGGGATGGCCAATATGTGGGAGAATATGTTCATGCATCATGACAGCCAGCTGAAAATAGTTACAGACCTCAAATCTCTTGATATTTCTCAAGATCATAAGGAAACAACCAAGCATCATTACGACCGCACCGTGCAGCTTTGGAATGTAATCCAAGAATGGGAGTCACAATTTGAGAAGCTTGTGACTCAACAGAAGCATTACATCCAAGCTCTTTTTAGCTGGCTCAAGTTAAATCTCATTCCCATCGAAAGCAACCTAAAAGAAAAAATCTCGTCTCCGCCAAGAGCCCAAAATCCACCAATCCAAGCCCTTCTTTATGCATGGCATGATTATCTCGACAAGCTTCCTGACGAGCTAGCGAAATCTGCTATTACCTCATTTGCTGCAGTGATAAAGACGATCATACTTCAGCAGGAGGAAGAGATGAAGTTAAAGGAGAAATGTGAGGAAACTAGAAAGGAATTCTTGAGGAAAAACCAAGCTTTTGAAGAATGGTACCAGAAGCATTTACAGCGAAGGGGGCCCGATGATCCAGAAAGAGATGATGTAAATACAAACAATCCGGTCTCGGAGAAGCAGTTTGTCGTGGAGAGCTTGAAGAAGAGATTAGAAGAAGAAACTGAATCTCACAAAAAATTGTGTGTTCAAGTAAGAGAGAAATCACTCCAGAGTCTCAAAACTCGCTTGCCTGAGCTCTTCCGTGCGTTATCGGATTATACTCAGGCGTGTTCTGATGCTTATGAGAAACTGAAGTCAATTGCACACTCTCAAGGTGGTGGTGCGGCGTGA 2139 0.4418 MGCAQSRIDNEESVSRCKDRKNLMREAVAARNAFAAGHSGYAMALKNTGAALSDYAHGETHLDDIELHPPPLHSDPPPPPPLEESLPPPPPLPPNFSPASLKRSVTLPPVSLQLQHRKIGGGISGGGDIVEEVEKGKGGDGDGLVHAPHAPHAPPSPSSGSKVMPPPPLPDSKNMAWDYFFMDMDNMGRGSLNEEDEIENEEGEIEGENVDVNGGHVEDEIEPKTPEKVEVDVYNKEHGHEHEHEDDVIREATHIEHSKTAPAEFRRAIKVVPSVTLMQILSSLDDHFLKASETAQDVSKMLEATRLHYHSNFADGRGHIDHSARVMQVITWNRSFKGVSNGEGAKDDFDSEDKETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVAILNKQKKRGASVESLGKTKAAVSHLHTRYIVDMQSMDSTVSEVDHIRDSQLYPKLVALVIGMANMWENMFMHHDSQLKIVTDLKSLDISQDHKETTKHHYDRTVQLWNVIQEWESQFEKLVTQQKHYIQALFSWLKLNLIPIESNLKEKISSPPRAQNPPIQALLYAWHDYLDKLPDELAKSAITSFAAVIKTIILQQEEEMKLKEKCEETRKEFLRKNQAFEEWYQKHLQRRGPDDPERDDVNTNNPVSEKQFVVESLKKRLEEETESHKKLCVQVREKSLQSLKTRLPELFRALSDYTQACSDAYEKLKSIAHSQGGGAA* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4043 712 Coils Coil 584 604 - -
Mtr3g4043 712 PANTHER DNA LIGASE (DUF630 AND DUF632) 1 709 - -
Mtr3g4043 712 Coils Coil 646 670 - -
Mtr3g4043 712 MobiDBLite consensus disorder prediction 619 636 - -
Mtr3g4043 712 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Mtr3g4043 712 PANTHER UNCHARACTERIZED 1 709 - -
Mtr3g4043 712 Pfam Protein of unknown function (DUF632) 277 582 IPR006867 -
Mtr3g4043 712 MobiDBLite consensus disorder prediction 150 170 - -
Mtr3g4043 712 MobiDBLite consensus disorder prediction 62 102 - -
Mtr3g4043 712 MobiDBLite consensus disorder prediction 71 97 - -
Mtr3g4043 712 MobiDBLite consensus disorder prediction 118 170 - -
Mtr3g4043 712 MobiDBLite consensus disorder prediction 619 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4043 Mtr-Chr3 54093293 54096768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4043 1 605 Acyl Lipid Metabolism Gene Families AT2G27090 25.287 4.85e-45 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4043 - - gmx:100807189 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4043 3 54093293 54096768 Mtr3g4043 3 54093293 54096768 ECH