Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4020 ATGGCAGGGCTAAATTTTGAAGCTGAATATCCTGACAGCTTTGATGTTCTGAAAGTTTTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTGTGAAAGGAAGGTACCCTTGTCCGATTGCAATGGGAAAATCATCTGTCTATTTTTCTCTGCCAACTGGTGTAGACCTTGCAGACTTTTCATTCCTCATCTTGTTGGTCTTTATGAAACACTGAGAAAGAGAGGGATAAATATAGAGATCATCTTCATCTCATTTGACCATGATGAGGATGGATTTAAAGAACACATCAAGAGTATGCCGTGGCTAGCTGTCCCATTTGATGCAAAATTGAATAGACGACTGATTGATAGATATCGGGTTGATCGAATTCCATCATTCATTCCATTATGTTCTGATGCCTTAACTGTTGACAAAAACATGATTGAGTGGATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGACATGAGGAATTGAAAGCCATAGATAAAAGAAAACGCGAAGAGGTAAATTTGGATGAATTATTGACACATGGAGGACGCAACTTTCTCATTTCAGGAGATGATAGAAAGGTGCTTGTATCTGAACTAACCGGGAAAACTGTAGGGCTATTTTTCGGTGCCTACTGGTCTCCTCCTTGTCATGCCTTCACCATTCAACTTGCAGATGCATACAACAATCTCAAGGATACAAAGGGCCACTGCTTTGAGATTGTTTTAGTTTCAACAGATAGGGACCTTAAAGAATTCAATGTCAACAGAACTAGCATGCCTTGGCTTGCTATCCCATATGAAGACAGAACAAGGCATGACCTCTGTAGAATCTTTGATATAAAAAAAATCCCAGCTTTGGTTTTCATTGGACCAGATGGAAAAGTCATTAGTTTGAATGGACAGTTCATGGTCTCCTCATACGGAGCAGAAGCTTTTCCATTTACTGAATCGAGGATAAGAGATTTAGAAGCGGCCCTGAGAAAGGAAGGAGAGGCTTTGCCTCAACAGGTTGAGGATGTCAAGCATGAACATCTACTTAAATTGGATATGGCCAAAGCATATGTATGTGATTCTTGTAAGAAACAAGGCAAGTTCTGGACATTCTCTTGTGATGTTTGTGACTATGATCTTCATCCTAGTTGTCTTGAGAAGGTCAACAATGACCAATGTTGGTAG 1179 0.3995 MAGLNFEAEYPDSFDVLKVFAAEGVEFLLSCERKVPLSDCNGKIICLFFSANWCRPCRLFIPHLVGLYETLRKRGINIEIIFISFDHDEDGFKEHIKSMPWLAVPFDAKLNRRLIDRYRVDRIPSFIPLCSDALTVDKNMIEWIEDYGADAFPFTRKRHEELKAIDKRKREEVNLDELLTHGGRNFLISGDDRKVLVSELTGKTVGLFFGAYWSPPCHAFTIQLADAYNNLKDTKGHCFEIVLVSTDRDLKEFNVNRTSMPWLAIPYEDRTRHDLCRIFDIKKIPALVFIGPDGKVISLNGQFMVSSYGAEAFPFTESRIRDLEAALRKEGEALPQQVEDVKHEHLLKLDMAKAYVCDSCKKQGKFWTFSCDVCDYDLHPSCLEKVNNDQCW* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4020 392 PANTHER THIOREDOXIN 1 385 - -
Mtr3g4020 392 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 342 391 IPR002219 -
Mtr3g4020 392 Gene3D Glutaredoxin 180 317 - -
Mtr3g4020 392 SUPERFAMILY Thioredoxin-like 34 130 IPR036249 -
Mtr3g4020 392 Pfam C1 domain 342 382 IPR004146 -
Mtr3g4020 392 PANTHER NUCLEOREDOXIN 3-RELATED 1 385 - -
Mtr3g4020 392 ProSiteProfiles Thioredoxin domain profile. 11 139 IPR013766 -
Mtr3g4020 392 Gene3D Glutaredoxin 21 158 - -
Mtr3g4020 392 Pfam Thioredoxin-like 42 127 IPR012336 -
Mtr3g4020 392 Pfam Thioredoxin-like 202 296 IPR012336 -
Mtr3g4020 392 ProSiteProfiles Thioredoxin domain profile. 145 325 IPR013766 -
Mtr3g4020 392 SUPERFAMILY Thioredoxin-like 188 297 IPR036249 -
Mtr3g4020 392 SUPERFAMILY Cysteine-rich domain 334 383 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4020 Mtr-Chr3 53925982 53928780 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4020 K17609 - gmx:100778160 693.345