Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4011 ATGGAGTCTTCAGGTTCCGATTATGATGTCATTATTGTCGGCGCCGGCGTCATGGGAAGCTCCACCGCCTACTACGCTGCCAAACGAGGCCTCAAAACCCTGGTTCTCGAACAATTCGATTTTCTTCACCACCGTGGTTCCTCCCACGGTGAATCCCGCACAATTCGCGCAGCTTATCCTCAACAACATTACTGCCAAATGGTCATGAAATCCTACCAATTATGGGAAGAAGCTCAAGCTCAAGCAGGCTTCAATGTCTATTACAAAGCTCATCACTTTGACATGGGTTCTTCAAACGATCCAATGATTCTCTCTGTCGTCGAAAACTGCCGCCAAAACAATCTCCCCTGTCAACTCCTCCGCCGTGAACAAGTTGCCGAGAAATTCTCCGGCAGGATCGACATTCCAGATGATTGGGTTGGTCTCTCAACAGAATACGGTGGTGTTATCAAAGCCACAAAAGCTGTAACGATGTTTCAGTCACTGGCGCGTAGCCACGGTGCTGTGTTAAACGACAATGTTGAAGTTGTAGACATAAAAAACGATGGTGGTAGCGTTGTTATTTTAACTGCGAAAGGTGAAAAATTCCGTGGCAAAAAATGTGTTGTGACAGTAGGAGCTTGGGTGAACAAGCTAGTAAAGAAGATAAGTGGGGTTGAAATTCCGATTCAACCATTGGAAACTCACCTATGTTACTGGAGGATCAAGGAAGGGCACCAAGGGAAGTTTACAATTGGTGGTGATTTTCCAACGTTTGCTAGCTTGGGTAGGGTTTTATTGTATGGATCGCCAAGTTTTGAGTTTCCAGGTTTGATTAAGGTGGCAGTTCACGGTGGTAACCTGTGTGACCCGGATAAGAGACCGTGGGGGGCAGGTGTGATGATGGATGAGATGAAGGAGTGGGTTGAAGGGAGATTCTGTGGGTTGGTTGATTCATCCGAGCCTGTTGTGAAACAGGCTTGTATGTATTCAATGACTCCGGATGAGGATTTTGTCATTGATTTCTTGGGTGGTGAGTTTGAGAAAAATGTGGTTTTGGGTGCCGGGTTTTCGGGTCATGGGTTTAAGATGGCTCCTGTTATTGGGAAGATTTTGACCGAGCTTGTGGTGGACGGGGGAACTAATGAGGTTGATTTGAAACACTTTAGGATTGGAAGATTCAAAAGTGACTTCTAA 1176 0.46 MESSGSDYDVIIVGAGVMGSSTAYYAAKRGLKTLVLEQFDFLHHRGSSHGESRTIRAAYPQQHYCQMVMKSYQLWEEAQAQAGFNVYYKAHHFDMGSSNDPMILSVVENCRQNNLPCQLLRREQVAEKFSGRIDIPDDWVGLSTEYGGVIKATKAVTMFQSLARSHGAVLNDNVEVVDIKNDGGSVVILTAKGEKFRGKKCVVTVGAWVNKLVKKISGVEIPIQPLETHLCYWRIKEGHQGKFTIGGDFPTFASLGRVLLYGSPSFEFPGLIKVAVHGGNLCDPDKRPWGAGVMMDEMKEWVEGRFCGLVDSSEPVVKQACMYSMTPDEDFVIDFLGGEFEKNVVLGAGFSGHGFKMAPVIGKILTELVVDGGTNEVDLKHFRIGRFKSDF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4011 391 Gene3D - 8 374 IPR036188 -
Mtr3g4011 391 SUPERFAMILY FAD/NAD(P)-binding domain 7 387 IPR036188 -
Mtr3g4011 391 SUPERFAMILY FAD-linked reductases, C-terminal domain 225 327 - -
Mtr3g4011 391 PANTHER PEROXISOMAL SARCOSINE OXIDASE 6 389 - -
Mtr3g4011 391 Pfam FAD dependent oxidoreductase 9 368 IPR006076 GO:0016491
Mtr3g4011 391 PANTHER PEROXISOMAL SARCOSINE OXIDASE 6 389 IPR045170 GO:0016491|GO:0050660
Mtr3g4011 391 Gene3D - 91 325 - -
Mtr3g4011 391 TIGRFAM soxA_mon: sarcosine oxidase, monomeric form 8 388 IPR006281 GO:0008115
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4011 Mtr-Chr3 53849242 53857102 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4011 K00306 - zju:107429922 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4011 3 53849242 53857102 Mtr3g4011 3 53849242 53857102 ECH