Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4004 ATGGCAACAAAAACAAAAGATAGTGTGGGGAGCAAGGAGAAGAAAAGCACATCTTCTAAAGCTCCCATAGCAACCACAAAAAGAACCTCAAGACCATCTAGTGCAAGTTCTGTAGAGAGGTCCACCACCCTATCAGAGAAACAAGTTCCCAACTACCTTAAACCAACACTTAGCTCACAACCAAGATCTCAATCCTTCAAGATTTCAAGAAATGATAATGCTCCAAACAAACCTAATTTGGATAGAAGAAGATCTTTTGACAAACCACCTTCACCTTCAAGGTTAGCAAAACAAATTCAACAATCTCCTTCAAGACTACAACAAAAATCAACTGTTAGAAACACTTTCCCTTCTTCCAAACCCATTTCAGAGAGAACATCATCAAAGACTCCAAAACAAGGTACTACTAAGAAGAGTAGTTCAAAGAATCTTGCTACAAAAAGTAGTACTAATGAAGAAACAACAGAAACAATCAATGTTGTTGAAACTAAGACAGAACCAAAAGTTAAAGAAGCTATCACAAACAATGATAATGCTGGGGAAGTAGAAGAAATTGAGAATATTCAAGAACATGATCAAGTTGAAAGTGTGCATGAGATTAATCAACCTCATGATCAAGTTGTGGAAGTAGAAAAAATTGAGAATATTCAAGAACGTGATCAAGTTGAAAATATACCTGAGATTAATCAATCACATCAAGCCGAGGAAGTAGAAAAAATTGAGAATATTCAAGAACGCGATCAAGTTGATAATGTACCTGAGATTAATCAATCACATGAAGCTGGGGAAGTAGAAAAAATTGAGAATATTCTAGAACGTGATCAAGTTGAAAATGTACCTGAGATTAATCAATCACATCAAGTTGGGGAAGTAGAAAAAATTGAGAATATTCAAGAACATGATCAAGTTGAAAATGTACCTAAGATCAATCAATCGCACGATCATGGTGACTTTGAACTTGAACAAAATCAAGGAAATGATCAAAATATTGTACACATTCAATCTGATAACGAGAATGAGAAAGAGGTGATTCCTATAGTGTCAGAAGAAGTAGCAAAAGAAGATCAAAACAAAGATGAACATGAAGATAATCAAGATCAAAATGAGAATACGGATACAAACCAAGAAGAAGGGAACATTAATGAGAGTGATAAAAAAGAAATGAATGATTCAACAAATGAAGGAGAAGTTATCGAGGCGAAAGAAAAAGTAGAAGATCAAAAGAATGAGGAAGAGTTGGAGAAAGAAGAAGTTAAAAGAGCAACAAATGAAGAAAAAGAGGAAATTGAAGAAGCTAAGGTGGATTCACCAAAGGAAAAGGAAGAAGAAAGTGGCGTGGTGCAAGGGAAGAAAGAATCTTCTCAAGTATCTAATGATGTGATTGAAGAAACTGCTAGCAAGTTACGAGAAGAGAGAAAGAATAAAGTGAGAGCATTGGCTGGTGCATTTCAAACTGTTATCGATCACCAGACTAAATGA 1479 0.3509 MATKTKDSVGSKEKKSTSSKAPIATTKRTSRPSSASSVERSTTLSEKQVPNYLKPTLSSQPRSQSFKISRNDNAPNKPNLDRRRSFDKPPSPSRLAKQIQQSPSRLQQKSTVRNTFPSSKPISERTSSKTPKQGTTKKSSSKNLATKSSTNEETTETINVVETKTEPKVKEAITNNDNAGEVEEIENIQEHDQVESVHEINQPHDQVVEVEKIENIQERDQVENIPEINQSHQAEEVEKIENIQERDQVDNVPEINQSHEAGEVEKIENILERDQVENVPEINQSHQVGEVEKIENIQEHDQVENVPKINQSHDHGDFELEQNQGNDQNIVHIQSDNENEKEVIPIVSEEVAKEDQNKDEHEDNQDQNENTDTNQEEGNINESDKKEMNDSTNEGEVIEAKEKVEDQKNEEELEKEEVKRATNEEKEEIEEAKVDSPKEKEEESGVVQGKKESSQVSNDVIEETASKLREERKNKVRALAGAFQTVIDHQTK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4004 492 MobiDBLite consensus disorder prediction 1 163 - -
Mtr3g4004 492 MobiDBLite consensus disorder prediction 378 448 - -
Mtr3g4004 492 MobiDBLite consensus disorder prediction 334 368 - -
Mtr3g4004 492 MobiDBLite consensus disorder prediction 76 90 - -
Mtr3g4004 492 MobiDBLite consensus disorder prediction 15 75 - -
Mtr3g4004 492 MobiDBLite consensus disorder prediction 277 459 - -
Mtr3g4004 492 MobiDBLite consensus disorder prediction 292 321 - -
Mtr3g4004 492 PANTHER CALMODULIN-BINDING PROTEIN-LIKE PROTEIN 1 491 - -
Mtr3g4004 492 Coils Coil 397 435 - -
Mtr3g4004 492 Pfam Plant calmodulin-binding domain 375 487 IPR012417 GO:0005516
Mtr3g4004 492 MobiDBLite consensus disorder prediction 94 162 - -
Mtr3g4004 492 SMART CaM_binding_2 382 488 IPR012417 GO:0005516
Mtr3g4004 492 PANTHER EMB|CAB62594.1 1 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4004 Mtr-Chr3 53780457 53785332 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4004 - - mtr:MTR_3g108830 848.195