Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3997 ATGGGTTTGAGAAACACCTCTGTTCTGTGCTTGGCACTTATGTTGTCTTTCTCTTCGGCCATTAATTGTTTGGACATAACCAAAACTTTGGGACAATATCCGGAACTCTCCACGTTCAGCAAATACCTAACCGAAACCAAGTTGGCTGAACAAATAAACAGTGGTAAAGCCGTTACCATTCTTGCCCTTGACAACAAAGCTATTGCTTCTCTTTCTGGTAAACCAATTGACGCCATTAAAGCCGTTATTGGGACCCATGTTATACCTGAATTCTACGATGAGAAAAAACTTTTTGATATCATTGGAAGCCATGCACAATTGCCTACACTTTCAACCGCTCCAGGTTTAGCCGCTAAAATCTACGTGTCACTTATTAATGAAGGTGAAATGGCATTTAGTTCTGCTGTTGAAGGCTCAACCTTCGATGCCACGCTTGTTCAAAGCACTGAGGCTGAACCAGGCGTTGTTTCAATTCTCCAGGTTTCACAGCCAATTGTTAAGGTTGGTGCTTCAGCTCCAGCAACTCCAGCAACACTATCAAAACCAGCAACACCTGCAGCTGTGTCAACATCCAGTGCCGGTGAGGTTGCAACACCAGCAGCTGTGCCAGCATCCGGTGCCGGTCAGGTTACAACACCAGCAGCATCACCTTCTGTGGTGATTGCTGAGTCACCTGAGAGTTTTGGTGATGCACCTGCTCCTGCTCCTAGTGCCTCTTCTCGTGCCACATTCAGATTCATTGGTGCTGTTATTGCCTTTGCTTCCATTTTTGTCTCTTTGTAA 783 0.4547 MGLRNTSVLCLALMLSFSSAINCLDITKTLGQYPELSTFSKYLTETKLAEQINSGKAVTILALDNKAIASLSGKPIDAIKAVIGTHVIPEFYDEKKLFDIIGSHAQLPTLSTAPGLAAKIYVSLINEGEMAFSSAVEGSTFDATLVQSTEAEPGVVSILQVSQPIVKVGASAPATPATLSKPATPAAVSTSSAGEVATPAAVPASGAGQVTTPAASPSVVIAESPESFGDAPAPAPSASSRATFRFIGAVIAFASIFVSL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3997 260 Pfam Fasciclin domain 35 156 IPR000782 -
Mtr3g3997 260 SUPERFAMILY FAS1 domain 30 122 IPR036378 -
Mtr3g3997 260 ProSiteProfiles FAS1/BIgH3 domain profile. 23 165 IPR000782 -
Mtr3g3997 260 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 240 - -
Mtr3g3997 260 Gene3D FAS1 domain 23 164 IPR036378 -
Mtr3g3997 260 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 240 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3997 Mtr-Chr3 53711529 53712517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3997 - - mtr:MTR_3g108760 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3997 3 53711529 53712517 Mtr3g3997 3 53711529 53712517 ECH