Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3996 ATGATGATAGGGTTAAGAAAACACAAATTAAGAAGACCTGCATTGGTCATTGCATTGGCTTCTGTGGCGTGCTTTGTTATGATTATAACCGCTTACATTTATAGTACACCAACGAGAACAGGTTCCGATAAATGCAACTTCTATTCCTCTGAAGGTTGTCGTACACGTGATCTATTTCCAAATGATTTTTCAAGGGAATTAACTGATAAAGAGATTGAATCTCGTGTTGTTGTTAAGGATTTACTCAACTATGTTCCTATTCAAACTAATACACCTAAGGTTGCTTTTTTGTTCATGACTCCTGGTACATTGCCTTTTGAGAAACTCTGGCACTTGTTCTTTCAAGGGCATGATGGCAGATTTTCAATTTATGTACATGCATCCAGGGAAAAACCAGTACATTTCAGCAGATACTTTGTTGGTCGAGAAATTCACAGTGAACCGGTGAGTTGGGGGAGTTTTGCAATGATGGAAGCAGAAAGAAGGCTTCTGGCAAATGCACTTTTAGACCCTGATAACCAACATTTTGTCTTGCTATCTGAAAGTTGTATACCTATACGTCACTTTGAATTCGTGTACAACTATTTAGTGTTTACAAATGTTAGCTTCATTGAATGCTTTGTTGATCCTGGCCCTCATGGTAACGGCCGATATATAGAGCATATGTTGCCTGAAGTAGAAATGAAGGATTTTCGGAAGGGTTCACAGTGGTTCTCAATGAAGCGGCAGCATGCTGTTATAGTCATCGCAGACAACCTTTATTTCACAAAATTCAAGTATTACTGCAGGCCAAATATGGAGGGAGGACGCAACTGCTACTCGGATGAGCATTACTTACCAACATATTTTAATATGCTTGATCCAGGTGGAATTTCAAACAGGTCGGTAACATATGTTGATTGGTCTGAAGGAAAATGGCATCCTAGATCATTCGGTGCTCAACATATTACATATAAACTCCTCAAAACCTTGACATCCCTTAATCAAAGTCCACATATTACAAGTGATTCAAAGAGAACAGTGTTGATCACTCCTTGCATGTGGAATGGGTCAAAAAGACCTTGTTATTTATTTGCCAGGAAGTTTTATCCAGAAGCCTTGGATAAATTGATGTATCTTTTCGCTAATTCAACTGTTTCTTTTGGAAATTAA 1152 0.3828 MMIGLRKHKLRRPALVIALASVACFVMIITAYIYSTPTRTGSDKCNFYSSEGCRTRDLFPNDFSRELTDKEIESRVVVKDLLNYVPIQTNTPKVAFLFMTPGTLPFEKLWHLFFQGHDGRFSIYVHASREKPVHFSRYFVGREIHSEPVSWGSFAMMEAERRLLANALLDPDNQHFVLLSESCIPIRHFEFVYNYLVFTNVSFIECFVDPGPHGNGRYIEHMLPEVEMKDFRKGSQWFSMKRQHAVIVIADNLYFTKFKYYCRPNMEGGRNCYSDEHYLPTYFNMLDPGGISNRSVTYVDWSEGKWHPRSFGAQHITYKLLKTLTSLNQSPHITSDSKRTVLITPCMWNGSKRPCYLFARKFYPEALDKLMYLFANSTVSFGN* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3996 383 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Mtr3g3996 383 Pfam Core-2/I-Branching enzyme 94 324 IPR003406 GO:0016020|GO:0016757
Mtr3g3996 383 PANTHER OS04G0607100 PROTEIN 6 376 - -
Mtr3g3996 383 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 6 376 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3996 Mtr-Chr3 53697995 53703314 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3996 - - lja:Lj1g3v1965170.2 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3996 3 53697995 53703314 Mtr3g3996 3 53697995 53703314 ECH