Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3990 ATGCCTCTAGGAGACAGAGGAGGTGATAAAAGTGAAGCTCGATTTTGCGGTGTAGAAACAGAGTTCAGCGATGACATGCCTAATGTCATTACTTTCAATCTCTCCACTGGAAAATTCGATTTCGTTGTTGCTCCTCTCACGGATCCTTCCTATAGGCCAAGCTTAGTGCAAAAGGATAGTTTGGGATCTGCTTCCCCGCCATTTGCTGGGTCAGACTTGGTCTTAAGTCCATCCCAGTGGAGTAGTCATGTAGTTGGAAAAATTAGCTCATGGATTGATTTGGACTCGGAAGATGAGACCTTTAGAATAGATTCTGAAACTACTCTTAGACAAGAATTAGCCTGGGCTTCTCATCTCTCATTACAGGCGTGTCTGCTTCCTTCCCCTAAAGGAACCTCTTGTGCTAATTATGCACGGTGTGTGAATCAAATCTTACAGGACCTGAGTAATATGCAGTTGTGGCTCAGGATTCCCTTGGTTGTTCCCGATGATGACTCTATGGATGCAAGCTCTGCCACTTTGGTGGACTCCTGGGAAACATGGAATTCATTTCGTCTAATGTGCGAGCATCACAGTCAACTGTCAGCTGCACTTGATATTCTGAGTACCCTGCCATCAGCAAATTCATTAGGACGGTGGTTTGGGGAGTCTGTTAGAGCAGCTATAGTAAATACGGATTCCTTTTTAACTAATGGTCGTGGATATCCATGCCTCTCCAAGCGTCATCAGATGTTGATTACACGGTTTTTTAACCATAATATACAGATAATTATATCTGGAAATTCTGGTCATCCTAAAGCAAGTGTGGATGCAAATGATTTTCATAATCGATCTGTTGCAGATTCACAAAGACATCCCTTGCGTCTATATCTGGAATATGTTGGACATCTGTACCAAAAAATGGATCCTCTTCCCGAGCAAGAACGTTTTGAGCTGGGATATAGGGATTATTTACAATCACCTTTGCAACCTTTGATGGATAATTTGGAGGCTCGTACCTATGAGACTTTTGAGAAAGATGCCATGAAGTACATTCAGTACCAAAGAGCAGTAAGTAAAGCAATGCTAGACATGATTCCTGATGAAGAGGCATCTGTTAAAACCATTGTACTGATGGTTGTTGGAGCAGGGCGTGGACCTCTTGTGCGGGCATCATTACAGGCTTCGGAAGAAACTGGGCGGAAGCTAAAAGTTTATGCCGTTGAAAAGAATCCAAATGCAGTTGTGACCCTTCATGCATTAGTTAAATTAGAGGGATGGGAGGATACTGTTACTATAGTCTCAAGTGACATGCGCTATTGGAACGCCCCTGAAAAAGCTGATATCTTGGTTAGCGAATTGCTAGGTTCTTTTGGTGACAATGAACTGTCTCCCGAGTGCCTTGATGGAGCTCAGAGGTTTTTAAAGCCGGGTGGAATTTCAATACCATCTTCGTACACAAGTTTCATCCAACCAGTGACAGCTTCAAAGTTATATAATGATGTTAAGGCACATAAAGATATTTCACACTTTGAAACTGCTTATGTTGTGAAAATACACAACGCAGCTCGACTTACACCATGTCAATCTGTTTTTACATTTACTCATCCAAAACCCGTTAATGATAGAGAAAGCAATCAACGCTATAAGAAGTTGCATTTTACAATACCAAATGACACTGGGTCCGCAATGGTACATGGATTTGCTGGCTACTTTGATGCCACTCTTTACAAGGATGTGCATCTTGGGATTGAACCTTCAACAGCTACACCAAACATGTTCAGCTGGTTTTCAATATTTTTCCCTCTACGGACACCTATTTGCGTGAAACCAGGTTCAAAACTTGAAGTAGATTTCTGGCGCTGTTGCGGTCCTAAAAAGGTTTGGTATGAGTGGTGTGTTGCATCTCCCTCTCCGTCTCCAATCCACAACAGTAATGGACGGTCATACTGGGTAGGGCTGTAG 1944 0.4259 MPLGDRGGDKSEARFCGVETEFSDDMPNVITFNLSTGKFDFVVAPLTDPSYRPSLVQKDSLGSASPPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDETFRIDSETTLRQELAWASHLSLQACLLPSPKGTSCANYARCVNQILQDLSNMQLWLRIPLVVPDDDSMDASSATLVDSWETWNSFRLMCEHHSQLSAALDILSTLPSANSLGRWFGESVRAAIVNTDSFLTNGRGYPCLSKRHQMLITRFFNHNIQIIISGNSGHPKASVDANDFHNRSVADSQRHPLRLYLEYVGHLYQKMDPLPEQERFELGYRDYLQSPLQPLMDNLEARTYETFEKDAMKYIQYQRAVSKAMLDMIPDEEASVKTIVLMVVGAGRGPLVRASLQASEETGRKLKVYAVEKNPNAVVTLHALVKLEGWEDTVTIVSSDMRYWNAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPGGISIPSSYTSFIQPVTASKLYNDVKAHKDISHFETAYVVKIHNAARLTPCQSVFTFTHPKPVNDRESNQRYKKLHFTIPNDTGSAMVHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFSIFFPLRTPICVKPGSKLEVDFWRCCGPKKVWYEWCVASPSPSPIHNSNGRSYWVGL* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3990 647 Pfam PRMT5 arginine-N-methyltransferase 306 475 IPR035075 -
Mtr3g3990 647 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 318 625 IPR025799 GO:0016274|GO:0018216
Mtr3g3990 647 Pfam PRMT5 oligomerisation domain 478 645 IPR035248 -
Mtr3g3990 647 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 335 646 IPR029063 -
Mtr3g3990 647 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 647 - -
Mtr3g3990 647 Pfam PRMT5 TIM barrel domain 38 300 IPR035247 -
Mtr3g3990 647 Gene3D - 478 646 - -
Mtr3g3990 647 PIRSF PRMT5 3 647 IPR007857 GO:0006479|GO:0008168|GO:0035246
Mtr3g3990 647 Gene3D Vaccinia Virus protein VP39 310 477 IPR029063 -
Mtr3g3990 647 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 1 647 IPR025799 GO:0016274|GO:0018216
Mtr3g3990 647 Gene3D - 14 307 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3990 K02516 - gmx:100782245 1140.56