Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3984 ATGCAAACCATTGAAGAAGAAGAAGCTGTTGGAAGCGATGTTCAGGATTCTCCTTCACATTTCGAGATTTTGAAGCTACGTCAACGTTGGGAACTCGCTTCCGTTCTCCATTTCCTTGACGTGTTTAGTCCATTACTTGGTAATGATCTGAAGGTTACAGCCGAAGAAATTGAGATCGGACTTGTTAAACCTAATGCTTTTCTTACTAACCTTCACATTCAACTTTTGAAGGGAATACCACCTGTTGGTAAAGCACTGCACGATTCTGATAAATGGGTGACCGCTCTCTCTAAGAAACTGACTACTTGGTGGCCATGGGTTGCTGAGGGGAAGAATCCACTTGTACCATCTAAAGGAGAGGAGATATCAAAGTACAAGGAGCTTGATCCATTGGATCGTTTACTACTGCTAAAAGCCCTCTGTGAAGTTAGAGCTGATCAACATGATGTGGTATCATATATTAATGATGCTTTAAAAGAAGGAACCCAGATTTCTTCTTTTCGCAAAGAGGCCTTTGGAATAGATGGAACTCGCACGTCCTATTGGTACGATGCAAACACTAAAGCGCAGAGTCACAGATTGTACAGGGAAACAATCACATCAGTCTCCACTCCAAACCGTAAGGGCAAAGGTTGTTTATCACTTCCCAACTTTCAATGGGAAACACTCGCCACCAATCTTGACGAATTTTCTGAAGTAGCTGAAAAATTATCATCTAGCAAGTCTCGTGTTGAGATTTATATGGGCGACAGGCTTCAAAGTGATGCTATTCCTGTTCTTGAGAAACTTCAAAAGAAAAAAGAAAGAGCAATGAAACAAAAAGAGAGACAGGATAAGCTCTTAAAAGATTTTCAGAACTCTTTTTCTTCTGGAAATACACGCTCTTGTCGCACTCGAAGGCCTATTAATTACAGTTTTGAAGCTTATGATCGAACAATTAAGGAGGCTATACAGTTGACAAACAAAAGGAAAAAGTCCCCTGCTGCTGACCAAGATAGAAACAGAGGATCGGAAGATGACTTCGACATAGATGTTTCTGCAGACAGTGATGATTCTAAAAGGGATACGCAACCTATATCCGAGAGTGATGATGCTGGTTATGAAATTGAGAATCACAGCAGTAGTGAGGAGAATGATGAACATGTGGGTCAGGCGGATAATTCCGAAGAACACTCTAGCCATGCAGTTTCTTATCCAAAAGGGGTTCGCTCTAGTAAGCGGATAGCTGGAGTCCCTGGCCATACTGTTCCAGAAAGCATGGGTTTGACTGCAAAGCAAAGAGTGAGACAGAGACCTACCCGAAATACTGCCATAGAATCTACTGTTGTTCCTGATTCAGAGGATGAATCGGATGAAGGGAAGACAGATCTTTCTTAG 1377 0.4183 MQTIEEEEAVGSDVQDSPSHFEILKLRQRWELASVLHFLDVFSPLLGNDLKVTAEEIEIGLVKPNAFLTNLHIQLLKGIPPVGKALHDSDKWVTALSKKLTTWWPWVAEGKNPLVPSKGEEISKYKELDPLDRLLLLKALCEVRADQHDVVSYINDALKEGTQISSFRKEAFGIDGTRTSYWYDANTKAQSHRLYRETITSVSTPNRKGKGCLSLPNFQWETLATNLDEFSEVAEKLSSSKSRVEIYMGDRLQSDAIPVLEKLQKKKERAMKQKERQDKLLKDFQNSFSSGNTRSCRTRRPINYSFEAYDRTIKEAIQLTNKRKKSPAADQDRNRGSEDDFDIDVSADSDDSKRDTQPISESDDAGYEIENHSSSEENDEHVGQADNSEEHSSHAVSYPKGVRSSKRIAGVPGHTVPESMGLTAKQRVRQRPTRNTAIESTVVPDSEDESDEGKTDLS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3984 458 MobiDBLite consensus disorder prediction 271 297 - -
Mtr3g3984 458 MobiDBLite consensus disorder prediction 426 443 - -
Mtr3g3984 458 PANTHER REMODELING AND SPACING FACTOR 1 17 378 IPR028938 GO:0006355|GO:0031213
Mtr3g3984 458 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 17 378 - -
Mtr3g3984 458 MobiDBLite consensus disorder prediction 318 458 - -
Mtr3g3984 458 MobiDBLite consensus disorder prediction 283 297 - -
Mtr3g3984 458 MobiDBLite consensus disorder prediction 318 388 - -
Mtr3g3984 458 Coils Coil 260 287 - -
Mtr3g3984 458 MobiDBLite consensus disorder prediction 444 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3984 Mtr-Chr3 53556143 53560943 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3984 - - adu:107463013 540.036