Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3944 ATGTTCAAGTCTCAATATCTTTCCTTCCAATACCTAATCATCATCCTCCTCCTCTCAATACTGTTCATTCACTTCTCTCAAGCTGACGTTGGCACTGCTTCCCATTACAGCCCTCCCTTTTTACCGACGGCGTGTTTTGGGGGAGATGCGTCACAATTTCCATCGAGCAACATGTTTGGTTCAGCTGGAGAAGGCATATGGGACAATGGTGCAGCGTGTGGGAGGTTGTATGAGGTGAGATGTATAAGTGCAGCTGTTCCTAGGACTTGTATTCCTGGTCAAACCATTCAGATTAAGATTGTTGATAGAGCACAATCTTCTGTTTCTAGGCCTTCATCGGATGATACTTCCATGGTTCTTTCCACCACTGCCTTTCAGATCATTGCAAATGTTTCTTCATCTTTGATTAACATTGAATTCCAACAGGTTTGA 432 0.4352 MFKSQYLSFQYLIIILLLSILFIHFSQADVGTASHYSPPFLPTACFGGDASQFPSSNMFGSAGEGIWDNGAACGRLYEVRCISAAVPRTCIPGQTIQIKIVDRAQSSVSRPSSDDTSMVLSTTAFQIIANVSSSLINIEFQQV* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3944 143 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 143 IPR007112 -
Mtr3g3944 143 Pfam Lytic transglycolase 66 139 IPR009009 -
Mtr3g3944 143 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 143 - -
Mtr3g3944 143 SUPERFAMILY Barwin-like endoglucanases 16 143 IPR036908 -
Mtr3g3944 143 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 143 - -
Mtr3g3944 143 Gene3D - 26 143 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3944 Mtr-Chr3 53179025 53185633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3944 - - gmx:100803494 213.001