Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3936 ATGAGATTAGTAAAAGGAAGTAAAGTGGAGATCCTTGTCAATACCCAGGGTCATGGAGTTGAATGGCATTGTGCCCGTATTATTTCTGGTAATGGGCACTCTTACAACGTTGAATACGACAATCCTAGTGTGACCGCAAAGCCTCTTTCAAACAGAGTTCCAAGGAAGTTCATCAGACCATGCCCCCCTGCTATTGAAAATATTGGGAGTTGGGAATGTAATGACACCGTGGAGGTTTGGGATGCTGGCTGTTGGAAAGAAGCTACTGTATTGACGGACATGACTGAAGAGTTCTACTTGGTAAGGGTGCATGGATCTTGCATGGAGCTGAAGGTCCACAAAATTCTCACGAGGATATGCCAATCATGGCAAAATGGTCAATGGATCATAAGTCCCAAGGGACCAGCAAAGTCTAGAGTCGTGAAGTTTAGCCAGAATTTGATTCCAAACAACTATAAGACGATGCCCGAAGTTCAGCAAGCTAAGAATGTTTGTTCACCTGGATTGGATGCTAGCTGTCTACATCTATACTCACCTTCAACATTGAAAAGTGTGTCCTCTTATGTTGGGGATTATCCTAGAAAGAGGAGCGCAGTTGTGATTATGGGCGAGTCTAAAAGATTCAAAGCAGTGTCCGCTGCTCCATTGCTGGAAAAGGTAGATGCTATTGCTTACCCACAGAATACTATGGGTGAAAAATATATGCATTATTCCTTCACTAATGAAACAAGGAAGGAGAAACCTTGTAATATTAAAACACACTTTCCTGAAACCATTCAAGAACCAGATTTTTCTAGTAATATGAGTTCAGTTGGCAGCTGTAGTGTAATAAGTGGTAGCGCAAATGAATTTTTTGGTGATACATTAGCAGGTCCTTGCCAAGATGACGTTTCCCTTCGCAGTGATGCAGAATCTCTAGATGTTAAAGATGTGGGTGGATTTTATGGTGATATGTTAGCAGGTCCTTGCCGAAGTGACGACGAAGATACCTCTTGCAGCGATGATGCAGAATCTATAGATGCTGAAGATGTGGACGAAGGCTGCACCTTTTTTCCAAAACAGGTTGTAGTAGAAAGAATCCATAGGGCCAGTGTCGGAGGCTTGCATGCCTTGCTTCCAATGGCTAAATTGATGCTAGGTGTGCTTAGAGTTCACACTTGCCATGTCATGTGCCAGAACATGAACTTGCTCAAAAGCTGCAGGCACAACCCTTGTATGGATGATCTTCTGAAGCATTATTCGGAAAATGATTTACAGGGAGTTTGTTCATGCTTGGTTGGCTTGTCAAGTGTCGCCAGTCACGGTTCGCTGTCGAAGTGTTCGTTATTGGTTGTTTTATCTTTCTAA 1347 0.4291 MRLVKGSKVEILVNTQGHGVEWHCARIISGNGHSYNVEYDNPSVTAKPLSNRVPRKFIRPCPPAIENIGSWECNDTVEVWDAGCWKEATVLTDMTEEFYLVRVHGSCMELKVHKILTRICQSWQNGQWIISPKGPAKSRVVKFSQNLIPNNYKTMPEVQQAKNVCSPGLDASCLHLYSPSTLKSVSSYVGDYPRKRSAVVIMGESKRFKAVSAAPLLEKVDAIAYPQNTMGEKYMHYSFTNETRKEKPCNIKTHFPETIQEPDFSSNMSSVGSCSVISGSANEFFGDTLAGPCQDDVSLRSDAESLDVKDVGGFYGDMLAGPCRSDDEDTSCSDDAESIDAEDVDEGCTFFPKQVVVERIHRASVGGLHALLPMAKLMLGVLRVHTCHVMCQNMNLLKSCRHNPCMDDLLKHYSENDLQGVCSCLVGLSSVASHGSLSKCSLLVVLSF* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3936 448 Pfam Agenet domain 6 63 IPR008395 -
Mtr3g3936 448 PANTHER PLANT TUDOR-LIKE RNA-BINDING PROTEIN-RELATED 1 262 - -
Mtr3g3936 448 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 262 - -
Mtr3g3936 448 SMART agenet_At_2 1 66 IPR014002 -
Mtr3g3936 448 SMART agenet_At_2 69 125 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3936 Mtr-Chr3 53113381 53118022 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3936 - - mtr:MTR_3g107680 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3936 3 53113381 53118022 Mtr3g3936 3 53113381 53118022 ECH