Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3933 ATGAGCAACAGAAACTTCTCAGCTAGTTCTGGTAGTGGAAATGCTAGCAGGACATTTGAGTTTGGAAGGACTCATGTGGTTAGACCTAAAGGGAAGCATCAAGCAACTATTGTTTGGCTACATGGTATTGGCGATAACGGCTCGAGCTGGTCCCAACTATTGGAAACTCTTCCTCTTCCAAATATTAAATGGATTTGTCCAACTGCTCCTACGCGGCCTGTAGCCTTATTTGGTGGATTTCCTTGCACTGCTTGGTCTGATGTTGGTGATATTTCAGAAGACGCTCCTAATGATTTGGAGGGTTTAGATGCTTCTGCAGCACATGTTGCCAATCTTTTGTCAACAGAGCCTCCAAATATCATACTCGGTATTGGTGGCTTCAGTAATGGTGCTGCAACTGCACTGTACTCAGCTACATGTCATGTTCTGGGACACTATGGAAATGGAAACATTTACCCTATTAACTTAAGCGCAATTGTTTCATTAAGTGGCTGGCTTCCTTGTTCAAGGACCTTAAGAAACCAGATCGGAGGATCACGTGATGGTATAAGGCGTGCAACATCGTTGCCCTTATTTATCGGCCATGGAAGCGCTGATGATGTGGTTGCATATGAACATGGAGAGAATTCTGCAAGGACCTTAAGCTCAGCTGGATTCCAGAATCTTATATTCAGAAGCTACAATGGGTTAGGTCACTATACAGTTCCTGAAGAGACTGATGAAGTTTGCAGATGGCTAACTGCAAATTTGGCACTTGAGGGGTTAAGGTTGAACTAG 777 0.4389 MSNRNFSASSGSGNASRTFEFGRTHVVRPKGKHQATIVWLHGIGDNGSSWSQLLETLPLPNIKWICPTAPTRPVALFGGFPCTAWSDVGDISEDAPNDLEGLDASAAHVANLLSTEPPNIILGIGGFSNGAATALYSATCHVLGHYGNGNIYPINLSAIVSLSGWLPCSRTLRNQIGGSRDGIRRATSLPLFIGHGSADDVVAYEHGENSARTLSSAGFQNLIFRSYNGLGHYTVPEETDEVCRWLTANLALEGLRLN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3933 258 Pfam Phospholipase/Carboxylesterase 25 247 IPR003140 GO:0016787
Mtr3g3933 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Mtr3g3933 258 Gene3D alpha/beta hydrolase 12 251 IPR029058 -
Mtr3g3933 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Mtr3g3933 258 SUPERFAMILY alpha/beta-Hydrolases 25 249 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3933 Mtr-Chr3 53087295 53092335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3933 8 254 Acyl Lipid Metabolism Gene Families AT5G20060 67.068 8.93e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3933 K06130 - gmx:100811642 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3933 3 53087295 53092335 Mtr3g3933 3 53087295 53092335 ECH