Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3924 ATGAGGTCATTTATGCTTGTAATAATTTCAAGCCTATTGTTCAAACAAATGAGCATTATTCTTGCAGATGTTGGTACTGCTTCTTCTTATGGTCCTCCATATATACCTACAGCTTGTGATGGGAATAGGAGACAGCAGTTTCCACCAGGAAATATATTTGTGGCAGTGAATGAAGGGTTGTGGGATAACGGGGCAGCATGTGGAAGGAGATACAGAGTAAGGTGTGTGAGTGGAATCAACAAGCCATGCAAAGGTGGTAGCAGTATTGATGTTAAAGTTGTTGATTCTATTACTTGTACAAAATCCTCATGCCCCCACACTTTCCACATGTCAACTGAAGCATTTGCAGCTATCTCACGTTTCCCTAATGCAAATATCAATGTTGAATACATTCAGATATGA 402 0.398 MRSFMLVIISSLLFKQMSIILADVGTASSYGPPYIPTACDGNRRQQFPPGNIFVAVNEGLWDNGAACGRRYRVRCVSGINKPCKGGSSIDVKVVDSITCTKSSCPHTFHMSTEAFAAISRFPNANINVEYIQI* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3924 133 Pfam Lytic transglycolase 55 130 IPR009009 -
Mtr3g3924 133 Gene3D - 23 133 IPR036908 -
Mtr3g3924 133 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 133 IPR007112 -
Mtr3g3924 133 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 2 132 - -
Mtr3g3924 133 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 2 132 - -
Mtr3g3924 133 SUPERFAMILY Barwin-like endoglucanases 16 130 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3924 Mtr-Chr3 53034753 53035647 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3924 - - mtr:MTR_3g107500 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3924 3 53034753 53035647 Mtr3g3924 3 53034753 53035647 ECH