Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3918 ATGGTTTCTGCTCTGTGCCTAACCCCTTCATGTCTTGGTACTAAAATTTTCTGTGTTCAAACTTCTGAATGTTCAGGTCTGAACATAACAAGCCATACAAATACGAACCGAAAACATTTCAGGGTCAATTATGGGTTCCAAGGCCCTCCCACAGAGAAGTATTGCCTTGTCACTGCAAAGGCTACAAATGACAACCAGCAAAACACAAAACCAAATAGTGTCATTTGTGCTGATTGTGATGGAAATGGAGCTATTGTCTGTTCTCAATGCAAAGGTAGCGGAGTGAACTCTGTTGATATTTTTGATGGACTGTTTAAAGCTGGTGCATCCTGTTGGCTTTGCGGAGGCAGGAAGGAGATGTTATGTGGGAATTGCAATGGAGCTGGATTTATTGGTGGCTTCTTGAGCACATATGATCAGTAA 423 0.4208 MVSALCLTPSCLGTKIFCVQTSECSGLNITSHTNTNRKHFRVNYGFQGPPTEKYCLVTAKATNDNQQNTKPNSVICADCDGNGAIVCSQCKGSGVNSVDIFDGLFKAGASCWLCGGRKEMLCGNCNGAGFIGGFLSTYDQ* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3918 140 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 70 131 IPR036410 -
Mtr3g3918 140 PANTHER PROTEIN BUNDLE SHEATH DEFECTIVE 2, CHLOROPLASTIC 1 134 - -
Mtr3g3918 140 Gene3D - 63 132 - -
Mtr3g3918 140 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3918 Mtr-Chr3 52999896 53001425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3918 - - cam:101494181 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3918 3 52999896 53001425 Mtr3g3918 3 52999896 53001425 ECH