Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3902 ATGCTATCACCAAACCCACTTTCTCTTTTATGTGCACTACTTCTATGCTTACCCCTAGCCATTCTTTTCACCATCACAATCACAACTACAACAACAACCACTTCCTCCTCCACCATGCACATCCCTAAAAAATCAAACCCAAACCTCACAACCACTTTCTTAAGTATAAATACTCAACACAACAACCAATCAAACAAACCAACAACAATAGACGAATACAAAGAAGAGGAAACGTTGTTCATTGTAGCCAACCATACAAAGCGAAAAGCAACATGGCCAAGAAAATTAGCATTCATGTTCTTAACAACAACTCCTCTTCCATTTGCTTCATTATGGGAATCTTACTTCAACCAAATCCCAAAAAAATTGTACAATATCTACATTCATGCTGACCCAACATTCTCTTACGACCCTCCTTTTTCTGGTGTTTTCTCAAACCGTATCATTCCTTCAAAACCAACAGCTAGATTCTCCCCCACTCTCACCTCAGCGGCGCGTCGATTAGTCGCACGGGCTCTCATCGACGATCGTTCAAATTACATTTTCATCCTTCTATCCTCTTCTTGCATTCCTCTTCACTCCTTCAATTTCACTTACCACACTCTTATTAACTCAAACAAAAGCTTCATCGAAATCCTCAACAATGAACCTAGTTCTTACGACCGCTGGGCGGCGCGTGGAGAACAAGCAATGCTCCCCACTGTAAAAATTGAGGATTTTCGCATTGGATCGCAGTTTTGGGCGCTGACACGTAAGCATGCAAGACTAGTTGTCAGCGATAGAAAAATTTGGTCGAAATTCAACAAACCATGCATACGTTTGGACTCGTGTTATCCGGAGGAGAATTACTTTTCTACCCTTATTAACATGTGGGACCCGAAGGGTTGTGTGCATGCTACACTCACACACGTGGATTGGGAAGGAAGAGACGATGGACATCCTCGGACTTACGTGGCAGATGAAGTTTGTCCTGAACTAATTTGGTCTTTGAGAAGAGATAGACCAAGATATGGTGATGATGATGATAACGGTGGATGGAGACGGCGTGATCCGTTTTTGTTTGCAAGGAAATTTTCAGCTGAGTGTTTACAACTGTTGACGGAGATAGCTGATGGCGTGATATTTAAGGACTAG 1134 0.4224 MLSPNPLSLLCALLLCLPLAILFTITITTTTTTTSSSTMHIPKKSNPNLTTTFLSINTQHNNQSNKPTTIDEYKEEETLFIVANHTKRKATWPRKLAFMFLTTTPLPFASLWESYFNQIPKKLYNIYIHADPTFSYDPPFSGVFSNRIIPSKPTARFSPTLTSAARRLVARALIDDRSNYIFILLSSSCIPLHSFNFTYHTLINSNKSFIEILNNEPSSYDRWAARGEQAMLPTVKIEDFRIGSQFWALTRKHARLVVSDRKIWSKFNKPCIRLDSCYPEENYFSTLINMWDPKGCVHATLTHVDWEGRDDGHPRTYVADEVCPELIWSLRRDRPRYGDDDDNGGWRRRDPFLFARKFSAECLQLLTEIADGVIFKD* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3902 377 Pfam Core-2/I-Branching enzyme 96 330 IPR003406 GO:0016020|GO:0016757
Mtr3g3902 377 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 2 377 IPR044174 GO:0016757
Mtr3g3902 377 PANTHER CORE-2/I-BRANCHING ENZYME 2 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3902 Mtr-Chr3 52863022 52864663 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3902 - - adu:107463186 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3902 3 52863022 52864663 Mtr3g3902 3 52863022 52864663 ECH