Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3896 ATGCAGAGACGAAGTCCTCCAAAGCATAGACACGATGGGACTTCGCCGCTGCCTCTTGGCATGGATTGGAGTCCTGCACCTCGAAAATGGAATGGGCGGGATACCGAATGGCCACACAATCATCGTACCGGTTGGAGTTATTGCGTCATAATACCTTCTTGGGTCTTCGTGCCAAAATCAAAGAATTCAGATCCTATAGTGTTCTACAGGCTTCAAGTTGGTATACAATCACCAGAAGGGATTACAAATATCCATGGAGTACTACGAAGGTTCAATGATTTTTTAAACTTGTATGTTGATCTTAAAAAGGAATTTCCTGGGAGAAATATCCCTCCAGCGCCACCCAAGGGACTCATGCGACTGAAAAGCCGAGCTTTGTTGGAAGAGAGAAGGCGCTCTTTGGAGGAGTGGATCACCAAACTATTGTCTGACATTGATATATCAAGATGTGCACCGGTGGCCTCATTTTTTGAGCTAGAAACTGCTGCTAGATCTTCATTTCAAGATGCAAGCCAGCAGAATTCAGTTAAAGATCCCGATTCCAATAACAGAGATTATTCGGTGCAATCATCTCTCCATTCGGGCTTATCATTAACTGCTGGAAGTTCATCTGTTGCATCAGATTATGGTAGTGATACACCATATGATGCATCGGAAGTAGGAACTCCAAGAATTGGACAGGATGATAATTCTGAAGTTGGGACAGATGATCTGACACTAGATGAAGATACAACGAATCCAATTGAGAAGCTTGTAAAATATGGCATATCAAATATTGATGAGGGTTTGTTTATGGGTCAGACTATTCTAGAGCAATTAGAAGGACTTCCTAGGCATAAAGTAAATGCCAGACATGGGAACAATGTTACAGGGAAAGACAGAAGTAATGGTAATTCATATGATTCTTCACTTCTAGGTAATAATACCATGGAGCTTTTCTCTCAGCCTGGGCATGCTAAAGTTTTGGGTCACATTCGTAAGCTTTCAAACGAAAGTGTTGGAAGTGATGGAAGCTCAATACGAGGTAGTGACATTTCAAATTTTGGGATTCCAAATTCATCTGGTGATGGCTCTGTCGACCTTCCTGGATCTGCTTCGGTTTCGAGAGAAACAGATATTGTGGGCCACACAAAATTGAAAAGTTCTGGTGATGCTCAATTAGTCCTTCCGCTAGATCAACGCAATAAACTGAACAGAATTCTTTCGACCATGCAGAGAAGGCTAGTCACTGCAAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCTGCAAAGGATTTTCTTACGACAAAGGTCAAGGATTTGGAAGTTGAACTTGAAACTTCTAAGCAAAAAAATAAGGAGAACTTGCAGCAGGCTATTCTGATTGAGAGGGAAAGATTTACTCAAATGCAATGGGATATGGAGGAACTTAGACGGAAGTCACTGGAAATGGAGATGAAACTTAAGTCTGAATCGGGTGGAAATGTTGGCCAGGATTTGACAAAGGAATCAATTGTTCAGCAGAACGATGTGCTGTTGCAGGATTTAGATGCTGCTAGAGAGCAGCTGGAAATTTTGTCAAAACAGTATGGTGAGCTAGAAGCAAAATCCAAAGCAGATATTAAAGTTCTGGTTAAAGAGGTCAAATCTCTCCGTAGTTCCCAAACAGAATTGAAGAAGGAACTTAGTGAGTCCATAAAGGAGAAATATGAAGCTGAGAAACTGCTACTTCACGAAAGAGAGAAGAGCGAACAGGCAGAAATTGCTTGGAGAAAACAGCTTGAGAAATGTGGGCTTCTTTTGAAGCAGCTTCAAGAGTGTAGTGTTGAGCTTCCTTACGAAGATGAGGACAGGACATTCTTGCAGTCATCATCTTCAACTGATGCTTTTAATAAATTAAAAACATCTGATGACCAAATTGACATCCTACTAGCAGAGGTAGAAAACCTAGAGAAGGACGCCGGAAGTGCAGCTTCTAATGTAGATAAAACCAATGACATAAAAGATGGTGTAATCTGTGGTGATGAAATGAGAAAGATCATATCTGATTTGTTCTTGGATAATGTTAGATTGAGAAAACAGACAAACCGTGTTACAAGGCATGCTCTCAAATTGGATATGACAGCAAGTGTTGATTCTCCTTCTATTGAAAATGTAACAAACATTTAG 2163 0.4055 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTEWPHNHRTGWSYCVIIPSWVFVPKSKNSDPIVFYRLQVGIQSPEGITNIHGVLRRFNDFLNLYVDLKKEFPGRNIPPAPPKGLMRLKSRALLEERRRSLEEWITKLLSDIDISRCAPVASFFELETAARSSFQDASQQNSVKDPDSNNRDYSVQSSLHSGLSLTAGSSSVASDYGSDTPYDASEVGTPRIGQDDNSEVGTDDLTLDEDTTNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKVNARHGNNVTGKDRSNGNSYDSSLLGNNTMELFSQPGHAKVLGHIRKLSNESVGSDGSSIRGSDISNFGIPNSSGDGSVDLPGSASVSRETDIVGHTKLKSSGDAQLVLPLDQRNKLNRILSTMQRRLVTAKTDMEDLIVRLNQEIAAKDFLTTKVKDLEVELETSKQKNKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSESGGNVGQDLTKESIVQQNDVLLQDLDAAREQLEILSKQYGELEAKSKADIKVLVKEVKSLRSSQTELKKELSESIKEKYEAEKLLLHEREKSEQAEIAWRKQLEKCGLLLKQLQECSVELPYEDEDRTFLQSSSSTDAFNKLKTSDDQIDILLAEVENLEKDAGSAASNVDKTNDIKDGVICGDEMRKIISDLFLDNVRLRKQTNRVTRHALKLDMTASVDSPSIENVTNI* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3896 720 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 710 IPR044588 GO:0015031
Mtr3g3896 720 MobiDBLite consensus disorder prediction 168 211 - -
Mtr3g3896 720 MobiDBLite consensus disorder prediction 1 25 - -
Mtr3g3896 720 Coils Coil 631 658 - -
Mtr3g3896 720 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Mtr3g3896 720 Coils Coil 429 456 - -
Mtr3g3896 720 Coils Coil 500 534 - -
Mtr3g3896 720 SMART PX_2 43 160 IPR001683 GO:0035091
Mtr3g3896 720 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Mtr3g3896 720 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 710 - -
Mtr3g3896 720 MobiDBLite consensus disorder prediction 168 242 - -
Mtr3g3896 720 Gene3D - 53 187 IPR036871 GO:0035091
Mtr3g3896 720 Pfam PX domain 86 158 IPR001683 GO:0035091
Mtr3g3896 720 Coils Coil 539 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3896 Mtr-Chr3 52795025 52802639 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3896 - - gmx:100792151 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3896 3 52795025 52802639 Mtr3g3896 3 52795025 52802639 ECH