Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3880 ATGTACAAGGTAGCAAAAGCATCACAATACCTTGTGATAACCGGAATCGGAATCAAAGACATAAAGCTCGCAAAGAAAGCATGGATTCTACCCGGTCAATCCTACTCCGTCTTCGACCTCTCACCTGTAAATTACACCTTTGAAGTTCAAGCAATGAGCGCAGAGAAACTTCCTTTTGTTCTCCCCGCTGTCTTCACTATCGGTCCTCGTGTGGATGATAAGGAAAGCCTTCTCAAATACGCCAAACTTATTTCACCGCACGATAAACTCTCCAATCATGTTAAGGAACTCGTTCAAGGAATCATCGAAGGCGAGACACGTGTCCTCGCTGCATCAATGACCATGGAAGAGGTTTTCAGAGGAACAAAAGAGTTTAAACAAGAAGTATTTGGAAAAGTTCAACTCGAACTAAACCAATTCGGTTTATTGATTTACAATGCTAATGTTAAACAGTTAGTTGATGTGCCAGGTCATGAGTATTTCTCATATTTGGGTCAAAAGACACAAATGGAAGCAGCGAATCAAGCAAGGGTTGATGTATCAGAAGCTAAGATGAAAGGTGAGATTGGTTCGAAATTGAGGGAAGGACAAACACTACAAAATGCAGCAAAAATTGATGCAGAGACAAAGATTATTGCGATGCAGAGGGCTGGAGAGGGCGACAAGGAGGGAATTAAAGTGAGGACTGAAGTGAAGGTTTTTGAGAATCAGAGAGAAGCTGAAGTGGCTGAGGCTAATTCTGAATTGGCTAAGAAGAAAGCGGCTTGGACTAAGGCGGCTCAAGTGGCCGAAGTTGAGGCTGCCAAAGCCGTCGCTCTAAGGGATGCTGAGTTACAAGGTGAAGTTGAGAGGATGAATGCTTTGACTACAACTGAGAAGCTTAAAGCTGAGTTCCTTAGCAAAGCTAGTGTTCAATATGAAACCAAGGTACAAGAAGCAAACTGGGAGCTGTACAAGAAACAAAAGGAGGCAGAAGCAATTCTGTATGAGAAGAAGGCAGAGGCAGAAGCACAGAAAGCATTAGCAGACGCAACATTTTATGCTCGCACGCAAGCAGCTGAAGCAGAGCTATATGCAAAGAAAAAGGAGGCAGAGGGAATTGTGACACTTGGGAATGCTCAAGGGGTGTATCTAAGTGCACTTCTCAATGCACTTGGAAACAACTACACTGCTGTAAGGGATTTCTTGATGATAAATGGTGGCATGTTTCAAGAGATCGCTAAGATTAATGCTGAGGCAGTACGCGGACTTGAGCCTAAGATTAGTATTTGGACTAATGGTGGTGATAATAGTGGGGGTGAAGGTGCGATGAAAGAAGTTGCTGGTGTCTACAAGATGTTGCCACCTTTGTTTAAGACTGTTCATGAGCAAACGGGAATGTTACCACCTGCTTGGATGGGAGTCTTGCCTGACAAAAACTTGAATTAG 1428 0.4342 MYKVAKASQYLVITGIGIKDIKLAKKAWILPGQSYSVFDLSPVNYTFEVQAMSAEKLPFVLPAVFTIGPRVDDKESLLKYAKLISPHDKLSNHVKELVQGIIEGETRVLAASMTMEEVFRGTKEFKQEVFGKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQARVDVSEAKMKGEIGSKLREGQTLQNAAKIDAETKIIAMQRAGEGDKEGIKVRTEVKVFENQREAEVAEANSELAKKKAAWTKAAQVAEVEAAKAVALRDAELQGEVERMNALTTTEKLKAEFLSKASVQYETKVQEANWELYKKQKEAEAILYEKKAEAEAQKALADATFYARTQAAEAELYAKKKEAEGIVTLGNAQGVYLSALLNALGNNYTAVRDFLMINGGMFQEIAKINAEAVRGLEPKISIWTNGGDNSGGEGAMKEVAGVYKMLPPLFKTVHEQTGMLPPAWMGVLPDKNLN* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3880 475 Gene3D Band 7 domain 38 155 IPR036013 -
Mtr3g3880 475 PANTHER FLOTILLIN-LIKE PROTEIN 3 2 469 - -
Mtr3g3880 475 Pfam SPFH domain / Band 7 family 22 183 IPR001107 -
Mtr3g3880 475 PANTHER FLOTILLIN-RELATED 2 469 IPR027705 -
Mtr3g3880 475 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Mtr3g3880 475 CDD SPFH_flotillin 28 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3880 Mtr-Chr3 52643417 52645942 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3880 K07192 - rcu:8280108 757.288