Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3863 ATGGCTCTCGGTTTCTTCGCTCTCGCTATCTTCCTCTTCCTCACCCTCGATCCTGATGTTTCTCCTTCTTCCACCGCTTCTGCTTCCGCTGCTTCCTCCGAAGGCGTCGAGGTTCAGATTACTTATGGTTCGGTGATTAAGTTGATGCATGAGAAGACGAAATTTAGGTTGCATTCTCATGATGTGCCGTATGGTTCTGGAAGTGGACAACAATCGGTTACTGGTTTTCCGAGTGTTGATGATGCCAACAGTTATTGGATTGTTAGGCCTGAGCCGGGAACTTCTGCTAAACAAGGTGACACCATTAAAAGCGGAACCATCATTAGATTACAGCACATGAGGACAAGGAAGTGGCTGCACAGCCATTTGCATGCGTCCCCAATATCAGGCAATCTCGAGGTCAGTTGCTTTGGTGGAGAAAATGAATCCGACACCGGAGACTATTGGAGGCTTTTAATAGAAGGAAGTGGAAAGACTTGGAAGCAGGATCAGAGGTTTCGGCTTCAGCATATTGACACTTCAGGCTATCTTCATAGTCATGATAAGAAATACAGTCGGATTGCTGGGGGACAGCAAGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGACAATGTCTGGCTGGCAGCTGAAGGTGTCTACCTTCCTGTTACTGAAAGCAAACAAGCTGAGTAG 672 0.4717 MALGFFALAIFLFLTLDPDVSPSSTASASAASSEGVEVQITYGSVIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPSVDDANSYWIVRPEPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGENESDTGDYWRLLIEGSGKTWKQDQRFRLQHIDTSGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTESKQAE* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3863 223 ProSiteProfiles MIR domain profile. 157 211 IPR016093 -
Mtr3g3863 223 ProSiteProfiles MIR domain profile. 99 154 IPR016093 -
Mtr3g3863 223 ProSiteProfiles MIR domain profile. 37 91 IPR016093 -
Mtr3g3863 223 SUPERFAMILY MIR domain 38 211 IPR036300 -
Mtr3g3863 223 Gene3D - 23 221 - -
Mtr3g3863 223 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 220 - -
Mtr3g3863 223 SMART mir_2 37 91 IPR016093 -
Mtr3g3863 223 SMART mir_2 157 211 IPR016093 -
Mtr3g3863 223 SMART mir_2 99 154 IPR016093 -
Mtr3g3863 223 PANTHER MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED 1 220 - -
Mtr3g3863 223 Pfam MIR domain 70 204 IPR016093 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3863 - - mtr:MTR_3g106130 414.461