Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3862 ATGGCGTTTGATCAAAAGGAACTGGAAGAGCAACTTATTCAAGCTGGGAACAAGCTTGCAGATCCTCCTTCCTCGGTGGATGAGCTTCTCTCACTGCTCAATCGACTTGAGAGTTACTTAGCAAAGGTGGAACAGGCACCTAGAACGTCTATGCGAACTGCGCTTGCTCCATGTATGAAAGAATTGGTTGGGAATAAACTTCTAAGGCATCCGGATCCGGATGTGAAAGCTGCACTTGCCGCTTGCATCAGTGAAATCACAAGAATCTCTGCACCCGATACTCCTTACGATGACGATCAAATGAAGGAGATATTCCAATTAATTGTATCTTCATTTGAAAATCTACATGATAAGTTAAGCCGATCGTATGAGAATAGGAGAATAGTCCTCGAAACTGTTGCAAAGGTCAGATCATGTGTGGTAATGTTGGACCTTGATTGTGATGCGCTGATTTTGGAGATGTTTCAGCATTTTTTGAAGACCATAAGGGATCATCATCCAAAGGATGTTTTTTCATCCATGGAAACCATTATGACACTTGTTCTTGAGGAAAGTGAAGATATATCCTTTGATTTGCTTTCTCCACTCCTGGAGAGCATTAAGAAAAACAATGAGGAAGTTTTCCCGATTGCCCGGAAATTGGGAGAGAGGGTCCTCGAAAGCTGCGGATCCAAACTAAAGCCCTGCTTGGTGCAAGCAGTGAGAACATTGGGTATATCTCTGGATGATTACAGTGAAGTACTTGGTTCAATTTTCCAAGAGGAAGCTAAGGCGATTAAAGAGGCTGCACAATCGCCAAAAGATAATCGAAATGGGAATAGAAATTCCAAGTCAGTCACAAACGATGGGGTTGCACGCGTTGGAGAAGATGAGGAGTTCAATGATTTGGATGGAAGAAAAGTTGAACAAAAACTAGAAGAAGCCACCAAGAAGAGCAGGAGAAAACCGAGTCATTCGACGAAATCTGCTAAACCATCCGAAAAGATGATTGATTCTGGAAGTCACAGAAAAAAAGTTCTCAGTTCCTCACACGAGGACCAGGAAGTTGCGTATGCAGTTACAAGTCGAAGAGCATACAATGTTGAATCTCAAGTTATGGCTTCTCCTTCACCTAGTGACAGTCTCCCTGACGAAAATCATTCAGAGAAACTCTGCAAAGCAGAAACTAAAGATAGCCCCTCAAATGTCGAGGTTGCAGAGGCTGTTTCAAAAAAGGCATCTGAAGGAGCAAGTATATCAAAAGCCAAACCTGTCAAGCAGCCAGTGAGAAAGGTGCTTGGTCAGAACTCAGGCGTAAAAAAAACTGCTGGTACAGATTCAGGCAAAAAACAAAGTGGGTCTGCTAGTGGTGCTGATGCTAAAAAGCACTCGGTCAAGAAATTGGATGATAACGAGGGTGGTGGTGGATCCTCTTCCAGGCAGCTGGTAGATAAGAAAAAGCGGGGGCAGGAGGAAATGGTTTCTTCTCCAAGGTCTGATATCAAATCATCTGAAGATGAAAAGTTAGAGGAGACTACCATGACAAATGGAAAGAGGAAACACGCCTCGGGAAGAAAAAATGAGTCTGATATCATGGAACATGATCAAAACCTTGTCGGTGTAAGACTTGAAGTATGGTGGCCGAAGGATCGTCAGTTTTACAAAGGTGTCATTGAATCTTTTGATTCTCGCAAAAAGAAACACAAGGTGGTTTATGACGATGGTGAAGTTGAAGTATTAAATCTTGCCAGGGAAAAGTGGAACGTCATTGAAGCTGATTCAGATGCAGATGAGGAAGAAGGAAGTGATCGTGGCAGTCTTGATGCTTCCATTGAAATGCCTGCAAGGAAGAAAACAAAACCAAGTTCCGATGAACCAACTAAGCAAGGAATGCCAGGTCTTTCTTCCAGTGGTGGAGCATCAGGATCAAGTAAATCAAAGGGTGTACTGAAGTTTGGTCAGAAGTCTACGGGTGGATACAAATCGAACGAATCCAGGACTGTTAGTGATTCTGAGGATGAAGTTAGCAGAAAGTTTAAGGACAGCACTCCTAAAAGTGGTAGCAGTAAATCTGCTACACAGACAATGACCGGTAAATCCAAGAACATTGGTGGTTCCAAGACAAGCAAAAGAAAGGATGATGACACTATCATGCCAAAACCCTCAGTCAAGTCTAAGCAGGAAACCCCAAAGAGTGGAATAACCAAACAAAAAACCCCAAAGACTGATGCTTCTGAGGGAAAGCCCCCAAAAGGTGTTGAAAAGTCCACTGTCGACAGTGGTGGCAAGGGGAAATCTAATTCATTGAAGAAAAAAGACTTGGAGGATGATGACTCTGAATCAGATGTTTCTGCAAGCGAGGAGGTAGAAGATACAAAAGGCAAGACATCAGGTGATGCCATGAATGGAAAGAAGCGTCAGAGAAGCTAG 2409 0.4305 MAFDQKELEEQLIQAGNKLADPPSSVDELLSLLNRLESYLAKVEQAPRTSMRTALAPCMKELVGNKLLRHPDPDVKAALAACISEITRISAPDTPYDDDQMKEIFQLIVSSFENLHDKLSRSYENRRIVLETVAKVRSCVVMLDLDCDALILEMFQHFLKTIRDHHPKDVFSSMETIMTLVLEESEDISFDLLSPLLESIKKNNEEVFPIARKLGERVLESCGSKLKPCLVQAVRTLGISLDDYSEVLGSIFQEEAKAIKEAAQSPKDNRNGNRNSKSVTNDGVARVGEDEEFNDLDGRKVEQKLEEATKKSRRKPSHSTKSAKPSEKMIDSGSHRKKVLSSSHEDQEVAYAVTSRRAYNVESQVMASPSPSDSLPDENHSEKLCKAETKDSPSNVEVAEAVSKKASEGASISKAKPVKQPVRKVLGQNSGVKKTAGTDSGKKQSGSASGADAKKHSVKKLDDNEGGGGSSSRQLVDKKKRGQEEMVSSPRSDIKSSEDEKLEETTMTNGKRKHASGRKNESDIMEHDQNLVGVRLEVWWPKDRQFYKGVIESFDSRKKKHKVVYDDGEVEVLNLAREKWNVIEADSDADEEEGSDRGSLDASIEMPARKKTKPSSDEPTKQGMPGLSSSGGASGSSKSKGVLKFGQKSTGGYKSNESRTVSDSEDEVSRKFKDSTPKSGSSKSATQTMTGKSKNIGGSKTSKRKDDDTIMPKPSVKSKQETPKSGITKQKTPKTDASEGKPPKGVEKSTVDSGGKGKSNSLKKKDLEDDDSESDVSASEEVEDTKGKTSGDAMNGKKRQRS* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3862 802 MobiDBLite consensus disorder prediction 618 658 - -
Mtr3g3862 802 PANTHER TRANSCRIPTIONAL REGULATOR 5 770 - -
Mtr3g3862 802 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 5 770 IPR039776 GO:0007064
Mtr3g3862 802 MobiDBLite consensus disorder prediction 779 802 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 266 282 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 596 617 - -
Mtr3g3862 802 SUPERFAMILY ARM repeat 62 238 IPR016024 -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 261 348 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 659 677 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 715 733 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 362 526 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 678 697 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 320 344 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 431 451 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 284 313 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 699 714 - -
Mtr3g3862 802 SUPERFAMILY Tudor/PWWP/MBT 530 569 - -
Mtr3g3862 802 Coils Coil 26 46 - -
Mtr3g3862 802 Gene3D - 519 579 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 474 526 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 376 390 - -
Mtr3g3862 802 MobiDBLite consensus disorder prediction 582 802 - -
Mtr3g3862 802 Pfam Sister chromatid cohesion protein PDS5 protein 27 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3862 Mtr-Chr3 52417705 52424326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3862 - - mtr:MTR_3g106100 1465.29