Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3857 ATGATGAAGCTTCGATTTATGGCTGTGGTTGTTATGCTGTTAAGTTGTACGGAGAGACACAAATCAACTGCAAAGGGTTCAGAGAATGAATACACAGTTGAATCAGTGAGAGCATCTTTAATTAGACAAGAGGATACAATCATATTTAGTGTGATTGAGAGAGCAAGATTCCCACTTAATTCTCCCACCTACCATCAACATTATGCTTCCATTCCTCACTTTTCTGGCTCCTTGCTCGATGTCGTTCTTGACTATACAGAAGCCATTCAAGCCAAGTTTTTGCATACTGCAGCCTCTTCGATTAACACAAACAAGAACATAAGGAAAGTGTATTTCCATGAGATGCTTCCGCTTTTTGTTGCTTTCGGGGATGATGGCAACTATGCACAAACTGCAGCTAGTGATCTTTCAATTCTGCAGGCCATCTCTAGAAGGATTCATTATGGAAAGTTTGTAGCTGAGGCGAAGTTTAGAGAATCTCCTCGTGACTATGAGCCTTTAATTCGTGCCAAGGACAGAAAAGCACTACTGAAATTGTTGACATCGAAGAATGTAGAAGAGATAGTTGTGAAGAGGGTTGAAAAGAAGGCCATGGTGTTTGGTCAAGAAGTGAGCCTTGATCATGATGTCAAGGGAAATTACAAGGTTGATCCAGCAATAGTTTCTCGACTATACAAGAAATGGATAATACCCATGACAAAAAATGTTGAACTTGAGTACTTACTGCGTCGTCTCGATTGA 741 0.4035 MMKLRFMAVVVMLLSCTERHKSTAKGSENEYTVESVRASLIRQEDTIIFSVIERARFPLNSPTYHQHYASIPHFSGSLLDVVLDYTEAIQAKFLHTAASSINTNKNIRKVYFHEMLPLFVAFGDDGNYAQTAASDLSILQAISRRIHYGKFVAEAKFRESPRDYEPLIRAKDRKALLKLLTSKNVEEIVVKRVEKKAMVFGQEVSLDHDVKGNYKVDPAIVSRLYKKWIIPMTKNVELEYLLRRLD* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3857 246 PANTHER CHORISMATE MUTASE 7 92 - -
Mtr3g3857 246 PANTHER CHORISMATE MUTASE 92 246 - -
Mtr3g3857 246 SUPERFAMILY Chorismate mutase II 28 246 IPR036263 GO:0046417
Mtr3g3857 246 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 93 246 IPR037039 GO:0004106|GO:0009073
Mtr3g3857 246 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 26 92 IPR037039 GO:0004106|GO:0009073
Mtr3g3857 246 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Mtr3g3857 246 ProSiteProfiles Chorismate mutase domain profile. 24 246 IPR008238 GO:0004106|GO:0009073
Mtr3g3857 246 PANTHER CHORISMATE MUTASE 7 92 IPR008238 GO:0004106|GO:0009073
Mtr3g3857 246 PANTHER CHORISMATE MUTASE 92 246 IPR008238 GO:0004106|GO:0009073
Mtr3g3857 246 TIGRFAM CM_pl-yst: chorismate mutase 92 246 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3857 Mtr-Chr3 52338408 52348124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3857 K01850 - gmx:100791095 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3857 3 52338408 52348124 Mtr3g3857 3 52338408 52348124 ECH