Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3855 ATGAGATGCAGTGTCATAATTTGTCTATTGACGTTATTGAGTTTAAACAACCTTTGCGAGTCAACCACCTCATCTTGTAAAGCATGGCTAGTGCAATCCATTCCCACCGATATGCCCCACCTCTCCCACTTTCCAGGAGTCCTCTCCACCGGGGATGTACTCAGGTGGATGGCTGAAAACTCGACTCGTAGACTTGATGTAATTGCTCAGTATTGGCAACTGCTAGCTTCTTCCGATGATCCTCGCTCCGGGGATTATGGTTACACTCAAGATCAGATGCACAAATTTGGTGCCCATCAAGGTGCTGCAGTTTATCAAGCATTAGATGCTGCTGCTGACCGTAATGTTAATATTAGGTTACTGTCTCACTCTGGGGTTTATCCAACATTTACCTTAGAACCATCCAAACTTGCTTATGGAAGGTCAAATGTTAAGAATGTGACCTTGTTATTGAAGGATTGGTGGGGCTCTGGAATTGTCCATGCCAAAGTTTGGATATCTGATAATAGGGATGTGTATATTGGATCTGCAAACAATGACTGGAAATCTCTCACACAGGTCAAAGAAGTTGGAATTTATCTTTCTGGTTGTCCTGTAATAGCTAAAAAGGTTGAGGTCTACTTTAACAATTTATGGACACTAGCATCTCTCAATCCTTCAGCTTACACCAAAACAGTGATGGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGTTGGTCACATTTCATCAAACCTAGGGAGAGGTGTAAGTCACCTCTTCCTAGATATGTAGAGACTCCTCATGTTGATGGATATCCTATTCTTTATGACCCTTATATGCCTGAAATTTCAATTCGAACTCCTGGGAGTAACTATTCCACAGAGCTTCCTCAAGTCAGCTATCTCTCCTTTGCTCCCCCAGAGCTATCATTTGGCAGTTACCAGAGTGATGAGCAGGCATGGATTGATACAATTAAATCTGTAGGAACAAAAGATACGGTTAGAATCAATACCATGGACTGGCTAGGTCAGTCACAATTTACAGACCAAACAATTTTCTGGTCATCTCTGTCTTCTGCAATATCAGAGGTTGTGTTTTCCAAGCATGCAACAGTAAAGATATTGGTGGCATATTGGGCACACTTCATAAATAGCACTGATGAGTACCTAAAGTATCTCCTCTATACCAACAATCTCTGCTCTTCTTCCAAATACAACAAATGCTCTGGTAAAGTTGAGATCAAATATTATGTGGTACCAGGTTTCAACAATACAGGACCTGCCATTCATAATGGAAGTAGTACAGGAAATATATACCCTGATTTTACAAGAGTGAATCATGGAAAATACGCAGTTAGTAATGTAAGGGCACACATTGGGACAAGCAACCTTGTATGGGACTATTTCTATGTTACAGCAGGTGTTAGTTTTGGGACATACAACACTGCCATTGTATCTCAACTTAGGGAAATTTTTGATGCTGACTGGAACTCGCCATATGCTGTTCCTATTCAAGAGTTTGAGAGAGTATATATTTCTAGTTTCAAATAG 1533 0.4077 MRCSVIICLLTLLSLNNLCESTTSSCKAWLVQSIPTDMPHLSHFPGVLSTGDVLRWMAENSTRRLDVIAQYWQLLASSDDPRSGDYGYTQDQMHKFGAHQGAAVYQALDAAADRNVNIRLLSHSGVYPTFTLEPSKLAYGRSNVKNVTLLLKDWWGSGIVHAKVWISDNRDVYIGSANNDWKSLTQVKEVGIYLSGCPVIAKKVEVYFNNLWTLASLNPSAYTKTVMDQQWQVERKVPCWSHFIKPRERCKSPLPRYVETPHVDGYPILYDPYMPEISIRTPGSNYSTELPQVSYLSFAPPELSFGSYQSDEQAWIDTIKSVGTKDTVRINTMDWLGQSQFTDQTIFWSSLSSAISEVVFSKHATVKILVAYWAHFINSTDEYLKYLLYTNNLCSSSKYNKCSGKVEIKYYVVPGFNNTGPAIHNGSSTGNIYPDFTRVNHGKYAVSNVRAHIGTSNLVWDYFYVTAGVSFGTYNTAIVSQLREIFDADWNSPYAVPIQEFERVYISSFK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3855 510 SUPERFAMILY Phospholipase D/nuclease 300 504 - -
Mtr3g3855 510 Gene3D Endonuclease Chain A 298 493 - -
Mtr3g3855 510 PANTHER PHOSPHOLIPASE D - RELATED 6 502 - -
Mtr3g3855 510 SMART pld_4 436 462 IPR001736 GO:0003824
Mtr3g3855 510 SMART pld_4 156 183 IPR001736 GO:0003824
Mtr3g3855 510 Pfam PLD-like domain 102 212 IPR025202 -
Mtr3g3855 510 Gene3D Endonuclease Chain A 49 216 - -
Mtr3g3855 510 PANTHER GM01519P-RELATED 6 502 - -
Mtr3g3855 510 CDD PLDc_vPLD3_4_5_like_1 30 197 - -
Mtr3g3855 510 CDD PLDc_vPLD3_4_5_like_2 295 491 - -
Mtr3g3855 510 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 156 183 IPR001736 GO:0003824
Mtr3g3855 510 SUPERFAMILY Phospholipase D/nuclease 57 214 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3855 K16860 - gmx:100778897 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3855 3 52323942 52328218 Mtr3g3855 3 52323942 52328218 ECH