Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3847 ATGGCGTTGGTAAATCCATTTCTTCTCCCTACCAAAACTCATTTTGCTTTGCCAGTTTCACCTCCACCATCCAAACAAATACTCCTTTGGACTAGCCCATCTTCCAGTTTCAGTTTCAATCTCAACAAAGGCTTGTCATCAAGCAGAAGAAAGCATGCAGGGTATCTCCCCGCCACGGCAGATGTCAAAACTGCATCAACTTTACTTGATGTGGAAGAAGATCAGAAAGTTCTAGTGGGACCTTCCAGTGAGCAAGAACGCAGGGGTGAGAGAGAACTTGCAGCTTATGATTGGAAAGAGGAATGGTACCCTTTGTACCTCACTAAGAATGTACCAGATGATGCACCGTTGGGTCTCACAGTATTTGACAAGAACCTTGTTTTGTTTAAAGATGGCAATGATCAGTTTCAATGCTATGAAGATCGGTGTCCTCACAGGTTAGCAAAACTATCTGAAGGCCAGTTGATTGATGGAAGGCTTGAATGCCTGTATCATGGATGGCAATTCGAAGGCGAAGGGAAATGTGTGAAGATACCTCAGCTTCCAGCTGATGCAAAAATTCCCAGGTCAGCCTGTGTTAAAACATATGAGGTGAGGGATTCTCAAGGTGTTATTTGGGTATGGATGTCACCAAAGGTACCTCCAAATGTCAGCAAAATACCTTGGTTTGAGAACTTTGCAAGGCCAGGGTTTCAAGATGTTTCAACAACTCATGAACTCCCATATGATCATTCTATTCTACTGGAAAACTTGATGGATCCTGCTCATATTCCAATCTCGCACGATAGAACAGATTGGACTGCAAAGAGAGAAGATGCACAACCGCTACTTTTTGAGGTGACAGAACGAACTGATAGAGGGTTTGCAGGTTGGTGGGGACGAGAGAAAGACGGCACTAAGCCTAACTTCTTACGGTTTGAGGCTCCTTGTGTTCTACAAAATAACAGGGAAATTGTAGATAAAAATGGTGAAATAAACTACTTCAGTGGTCTGTTCCTTTGTAGGCCAACTGGACAAGGGAAATCCATGCTGATAGTGAGGTTTGGAGGAACAAAAAGATCTCCAATAGTAAAACTGTTTCCTCAATGGTACTTCCATCAGAATGCAAGCAAGGTTTTTGAACAAGACATGGGATTCTTATCATCACAAAATGAAATTCTTTTGAAAGAGAAGGTTCCGACAAAGGAACTATACCTGAATTTAAAATCATCAGACACATGGGTTGCTGAATACCGTAAGTGGATGGATAAAGTGGGACACGGGATGCCATATCATTTTGGTCACAACACTATTTCCCTGCCCAAAGAGCCGGCTGTGATTGAACATGCGCCTGCTGGACTCATTGCAGGACTATCAGCTTCTTCACCTGCAAAGGGGGGCATTGGAACAATGCATGCTCCAAATTTAGCAAATAGATATTTTAGGCATGTAATACATTGCAAAGGATGTAGAACCGCCGTCAAAGCTTTTCAAACTTGGAAAAATGCCCTTTCGGCTGTGGTCGTTGCATTAGCTGCATTAGCAATTCTGGTTACTGGGAGACAATGGAAAGCCATCCTGTTGGCATCTGCAGCCCTGTGCTCTGTTGGAGTATATGCTTGTTCAACAGCTGTTGCATTGAATACAACAAATTTTATTAGGACACATAGGAGATTGTGA 1659 0.4286 MALVNPFLLPTKTHFALPVSPPPSKQILLWTSPSSSFSFNLNKGLSSSRRKHAGYLPATADVKTASTLLDVEEDQKVLVGPSSEQERRGERELAAYDWKEEWYPLYLTKNVPDDAPLGLTVFDKNLVLFKDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVIWVWMSPKVPPNVSKIPWFENFARPGFQDVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLLFEVTERTDRGFAGWWGREKDGTKPNFLRFEAPCVLQNNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPIVKLFPQWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHNTISLPKEPAVIEHAPAGLIAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCRTAVKAFQTWKNALSAVVVALAALAILVTGRQWKAILLASAALCSVGVYACSTAVALNTTNFIRTHRRL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3847 552 Gene3D - 229 420 - -
Mtr3g3847 552 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 63 552 - -
Mtr3g3847 552 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 102 207 IPR017941 GO:0051537
Mtr3g3847 552 SUPERFAMILY Bet v1-like 202 421 - -
Mtr3g3847 552 Pfam Pheophorbide a oxygenase 306 391 IPR013626 GO:0010277
Mtr3g3847 552 Pfam Rieske [2Fe-2S] domain 101 183 IPR017941 GO:0051537
Mtr3g3847 552 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 63 552 - -
Mtr3g3847 552 Gene3D - 96 226 IPR036922 GO:0051537
Mtr3g3847 552 SUPERFAMILY ISP domain 97 216 IPR036922 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3847 Mtr-Chr3 52265604 52268451 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3847 - - gmx:100818625 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3847 3 52265604 52268451 Mtr3g3847 3 52265604 52268451 ECH